KEGG   Pectobacterium cacticida: OI450_07125
Entry
OI450_07125       CDS       T08693                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K19789  DNA repair protein RadD
Organism
pcac  Pectobacterium cacticida
Brite
KEGG Orthology (KO) [BR:pcac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcac03400]
    OI450_07125
DNA repair and recombination proteins [BR:pcac03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     OI450_07125
SSDB
Motif
Pfam: ResIII DEAD Helicase_C SWI2_SNF2 zinc_ribbon_2 zf-tcix AAA_30 DZR zf-ribbon_3 AAA_16 AAA_22 AAA MciZ SLFN-g3_helicase UPF0547
Other DBs
NCBI-ProteinID: UYX08118
LinkDB
Position
complement(1489302..1491062)
AA seq 586 aa
MAFTLRPYQREAVSATLNYFRHHTQPAVIVLPTGAGKSLIIAELARLARGRVLVLAHVKE
LVAQNYEKYCAWGLEADIFAAGLQQRESQGKVVFGSVQSVARNLSQFDRAFSLLIIDECH
RISDDENSQYQHIIHHLQKTNPRLRLLGLTATPYRLGKGWIYQYHYHGMVRGDEHCLFRD
CIYELPLRYMIKQGFLVSPNRLDMPVVQYDFSTLAARSNGLFSEADLNHELKRQQRITPQ
IISQIVDYAQTRRGVMIFAATVEHAKEITALLPVGQAALVSADTPVIERDALINAFKQQS
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLYPEKTDCLILDYAGNP
HDLYTPEVGNSKPHGDSQPVQVFCPQCGFANLFWGKTASNGEILEHYGRRCQGWEMTENG
QRLQCDFRFRFKVCPHCGAENDIAARRCHQCEEVLVDPDDMLKAALKLKDALVLRCSGMA
FEQGRDAKGEWLTITYHDEDGAEVSERFRLHTSAQRHVFLQQFLRVHQRAPGIPLTWQQA
TDIIAQQALLRAPDFVVARKKGKFWQIREKLFDYQGRFRRANELRG
NT seq 1761 nt   +upstreamnt  +downstreamnt
atggcattcacgctccgcccataccagcgtgaagcggtttccgccacgctcaattatttt
cgtcaccatactcaaccggctgtcattgttcttccgaccggcgccgggaaaagcctgatc
atcgccgaattggcgcggcttgctcgtggccgtgtactcgtgctggcccacgtcaaagag
ttggttgcgcaaaactacgaaaaatactgcgcctgggggctggaggcggatatcttcgcc
gcaggattacagcagcgagagagtcaggggaaagtggttttcggcagtgtgcagtccgtt
gcacgcaacctcagccagttcgatcgtgccttttcactgctgatcattgatgaatgtcat
cgtattagcgacgatgaaaacagccagtatcaacacatcatccaccacctgcaaaaaacc
aaccctcggttgcgactgctcggtctcactgcgacgccctatcggctggggaaaggttgg
atatatcagtaccactatcacggtatggtacgcggcgatgagcattgtctattccgcgat
tgtatctatgaattgccgctgcgttatatgatcaaacagggttttctggtatcgcccaat
cggcttgatatgcccgtggtacagtatgatttcagcacacttgccgctcgcagcaatggg
cttttcagcgaggcggacctgaatcacgaactcaaacgtcaacagcgtattacgccgcag
attatcagccaaattgtcgactatgcgcaaacccggcgcggcgtaatgatttttgccgca
accgtcgaacatgctaaggaaattaccgccctgctccctgtcggccaggcggcgctagtc
agtgccgatactcctgtaattgaacgcgatgcgctgattaacgccttcaaacagcagtcg
ctgcggtatctggtcaacgtcgccgtgctaaccaccggctttgatgccccccatgtcgat
ctcatcgccattcttcgcccaaccgagtccgtcagtctgtatcagcaaattgttgggcgc
ggtcttcgcttgtatccagaaaaaacagactgcctgatactggattacgcaggcaacccg
cacgatctctatacgcccgaagtcggcaatagcaagccacacggcgatagccagccggta
caagttttttgtcctcaatgcgggtttgccaacctattttggggcaaaaccgcgtcaaac
ggcgaaatcctagaacattatggacgccgctgccaagggtgggaaatgacggaaaacggg
cagcgtctacagtgtgacttccggtttcgtttcaaagtctgcccacactgcggcgcagaa
aatgatatcgcagcccgacgctgtcaccagtgcgaggaagtcttggtcgatcctgatgac
atgctaaaagccgcgctgaagctgaaagatgcgttggttttacgctgtagcggcatggcg
tttgaacaagggcgggatgcgaagggcgaatggctaaccatcacctatcacgacgaggac
ggcgcagaggtcagtgagcgttttcgcctacacacatccgcccagcgccacgtttttctg
caacagtttctccgcgtgcaccaacgggcaccgggaataccgctgacctggcagcaggcc
actgatattatcgcgcagcaggctttattacgtgcccccgactttgtggtagcccgcaaa
aaaggcaaattttggcagatacgtgagaaactgtttgattatcagggtcgctttcgccgc
gcgaatgaactccgcggctaa

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