Pectobacterium cacticida: OI450_08100
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Entry
OI450_08100 CDS
T08693
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pcac
Pectobacterium cacticida
Pathway
pcac03030
DNA replication
pcac03430
Mismatch repair
pcac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OI450_08100 (holB)
03430 Mismatch repair
OI450_08100 (holB)
03440 Homologous recombination
OI450_08100 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcac03032
]
OI450_08100 (holB)
03400 DNA repair and recombination proteins [BR:
pcac03400
]
OI450_08100 (holB)
Enzymes [BR:
pcac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OI450_08100 (holB)
DNA replication proteins [BR:
pcac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OI450_08100 (holB)
DNA repair and recombination proteins [BR:
pcac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OI450_08100 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
Motif
Other DBs
NCBI-ProteinID:
UYX08293
LinkDB
All DBs
Position
1713858..1714871
Genome browser
AA seq
337 aa
AA seq
DB search
MEWYPWLNAPYRQLIAQYQAGRGHHAVLLHALPGMGDESLFYALSRWLICQRPDGVKSCG
HCHACHLMMAGTHPDWHRLSPEKGKQNLGVDPVRDVVEKIYQHSQQGGAKVIWLSAAELL
TDAAANALLKTLEEPPQNTYFLLGCRDPARLLATLRSRCLYYYLDVPGERQSIPWLNARH
PYDAEALRTALRLQSGAPLAAEALLQPERWQQRSALCQVLSAALTSRDGLALLPTLNHED
ADTRIHWLTTLLLDAMKWQLGAGASVVNLDQVELVTRLASEPAAHLQYELSMWLSCRQKL
LTITGVNRELLLTERLLDSERTFVSPVVRDSHPFLFN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtggagtggtatccgtggctgaatgcaccttatcgccagcttatcgctcaatatcaagcg
ggtagggggcatcatgcggtgctattacacgctttgccggggatgggcgacgaatcgctt
ttttatgcgctaagccgatggttgatctgccaacggcccgatggggtgaaaagttgcggt
cattgtcacgcttgccatctaatgatggcggggacgcacccagactggcataggttaagc
ccggagaaaggcaaacaaaatctgggcgtcgatccagtacgtgacgtcgtagaaaagata
taccagcattctcaacaaggcggcgcaaaagtgatctggctgtctgccgccgagcttctg
acagatgccgccgcgaatgcgttattgaaaacgctggaagagccgccgcagaatacctat
tttttattgggttgccgtgatcccgctcgattactggctacattgcgcagccgctgtctg
tattactatctggatgttcctggcgagaggcagagtataccgtggttgaacgcccgccat
ccttatgacgccgaagcgttacgtacggcattaagattgcaatcgggggcgccgctcgcc
gcagaagcgttattgcaaccggagcgctggcagcaacgaagtgcattatgccaagtattg
tctgccgcgctgacttctcgcgatgggcttgcgttactgcccacattgaatcatgaagat
gccgatacgcgtattcactggttgacgacattattgctggatgcgatgaaatggcaattg
ggggcgggcgcatcggtggtgaatctggatcaggtagaattggttacgcgtttggcaagt
gaacctgctgcacatttgcagtacgagctgtcgatgtggttgtcctgccgacaaaaattg
ttgaccattactggcgtgaatcgagagctactgctaacggaacgtttacttgatagcgaa
cgtacgtttgtctccccggtggtgcgcgacagccatccctttctgtttaattaa
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