Physeter catodon (sperm whale): 102974229
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Entry
102974229 CDS
T06011
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X3
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03250
Viral life cycle - HIV-1
pcad04623
Cytosolic DNA-sensing pathway
pcad05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102974229 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102974229 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102974229 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102974229 (SAMHD1)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102974229 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
102974229
NCBI-ProteinID:
XP_007116839
Ensembl:
ENSPCTG00005005463
UniProt:
A0A2Y9F7T3
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All DBs
Position
14:21123338..21190843
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AA seq
628 aa
AA seq
DB search
MQSADSQKPPKRPRRDGSPRTPPNTPPADAERSPSPDLHPDHRTWGPEQVCSFLRGCGFS
DSGLLERCREKKITGSILPFLDESLLEDLGISSYGKRIKLLNNIQQLDQTHVYTMKVIND
PIHGHIEFHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGRLVR
ELSEKQPELQISERDMLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPDVKWTHEQGSIMM
FEHLVNSNGLRDVMEHYGLIPEEDIWFIKEQITGPPESPVKDSSKWLYKGRPKEKSFLYE
IVANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVNDRKHICTREKEVGNL
YDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADPYIEITGSEGNKYHISTAIDDMEAF
TKLTDNIFLEILYSADPKLDAARAILKKIECRNLYKFVGETQPVGQKKIKRENYENLPKG
VASAKPSDMVLEPELKAEDFIVDVINMDYGMDDKNPIDHVRFYCKSEPSQAIMITKNQVS
QFLPEVFAEQLIRVYCKKTDKRSLHAAHQHFVHWCLINDFTKPQDGDIVAPLITPRKLEW
NNTDSAQSPAHTREASKFRAQLFPDDPV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgcggactcccagaagccccccaagcggccccggcgcgatggtagcccgaga
accccgccaaacacccctcccgcagacgcagagaggtccccgagccccgaccttcacccc
gaccaccggacctggggcccggagcaggtgtgctccttcctaaggggctgtggcttcagc
gattctggactgctggaacgctgccgagagaagaaaatcacaggttcaatactgcccttt
cttgatgagtctcttcttgaagaccttggaataagttcctatgggaagagaataaagctg
cttaataatatccaacaactggatcaaactcatgtttatacaatgaaggtgattaatgat
cctatccatggtcacattgaatttcaccctcttctcatccgaatcatcgacacacctcaa
tttcagcggctgcgatatattaagcagttgggaggcggttactatgtttttccaggagct
tcacacaatcgatttgagcatagtctaggcgtagggtatctagcaggacgtctagttcgt
gaactgagtgaaaaacaaccagagctgcagataagtgaacgagatatgctctgtgttcag
atcgctggtctttgtcatgatctcggtcatgggccattttctcatatgttcgatggaaga
tttattccacttgctcgcccagatgtgaaatggacgcatgaacagggctcgattatgatg
tttgagcacctagttaattctaacggactcagagatgtcatggaacactatggtctcatc
cctgaagaagatatttggtttatcaaggaacaaattacaggaccacctgaatcacccgtc
aaagattcttcaaagtggctgtataaagggcgtcctaaagaaaaaagcttcctttatgag
atagtggccaataaaagaaatggcattgatgtggacaaatgggattattttgccagggac
tgccatcatcttggaatccaaaataattttgattacaagcgctttattaagtttgcccgt
gtctgtgaggtaaatgataggaagcacatttgtactagagaaaaggaggttggaaacctg
tatgacatgttccacacacgcaactctttgcatcgcagagcttatcaacacaaagttggc
aacatcattgatacaatgattacagatgccttcctcaaagcagacccttacatagagata
acaggttctgaaggaaacaagtatcacatttctacagcaattgatgacatggaagccttc
actaagctgacagataacatttttctggagattttatactctgctgatcccaaattggat
gctgcacgagctattttaaagaaaattgaatgccgtaatctatacaagtttgtgggtgag
actcagcctgtgggacaaaaaaagattaaaagggaaaactacgaaaaccttccaaaaggg
gtcgccagtgctaaacccagtgacatggtgctagaacctgaactgaaggctgaagatttc
atagtggatgttatcaacatggattatgggatggacgacaagaatcctattgatcatgtt
cgcttctattgtaagagtgagcccagccaggcaatcatgattactaaaaatcaggtgtca
cagtttttgccagaggtatttgctgagcagctgattcgagtttattgtaagaagacggat
aaaaggagtctgcatgctgcacaccagcatttcgttcactggtgtttaatcaatgacttc
accaagccgcaggatggtgatattgtagccccacttataacacctcgaaaattggagtgg
aataacacagattcagcccagagtccagctcacacccgagaagcatccaaattcagagcc
cagctttttccagatgacccagtgtga
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