Physeter catodon (sperm whale): 102976262
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Entry
102976262 CDS
T06011
Symbol
SOX8
Name
(RefSeq) transcription factor SOX-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
pcad
Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102976262 (SOX8)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102976262 (SOX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102976262
NCBI-ProteinID:
XP_007100194
Ensembl:
ENSPCTG00005016961
UniProt:
A0A2Y9EE02
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MLDMSETRAQPPCSPSGTASSMSHVEDSDSDAPPSPAGSEGLGRAAGAGGGARGDAAEAA
DERFPACIRDAVSQVLKGYDWSLVPMPVRGGGGGALKAKPHVKRPMNAFMVWAQAARRKL
ADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVK
TGQSDSDSGAELGHHPSGAIYKTDAGLGDAHHHGDHTGQTHGPPTPPTTPKTDLHHGGKQ
ELKLEGRRLVDSGRQNIDFSNVDISELSSEVIGNMDTFDVHEFDQYLPLNGHSALPTEPG
QPAAASSYGGTSYSHSGAAGIGASPVWAHKGAPSASASPTEAGPPRPHIKTEQLSPGHYG
DQSHGSPGHTDYGSYSAQASVTTAASAVAASSFTSSQCDYTDLQAPNYYGPYPGYPSGLY
QYPYFHSPRRPYASPLLGGLSVPPAHSPPSNWEQPVYTTLTRP
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctggacatgagcgagacccgcgcccagccgccctgcagcccatctggcactgctagc
tccatgtcgcacgtggaggactcggactcggacgcgccgccgtcgcctgccggttccgag
ggtctgggccgtgcggcgggcgcggggggcggcgcccggggcgacgcagccgaggcggcg
gacgagcgcttccccgcctgcatccgcgacgccgtgtcgcaggtgctcaagggctacgac
tggagcctggtgcccatgccggtgcgaggcggcggcggcggtgcgctcaaggccaagccg
cacgtgaagcggcccatgaacgccttcatggtgtgggcgcaagcagcgcgccgcaagctg
gcggatcagtacccgcacctgcacaacgcggaactcagcaagacgctgggcaagctgtgg
cgcttgctgagtgagagtgagaagcgccccttcgtggaggaggcagagaggctgcgggtc
cagcacaagaaggaccacccagattataagtaccagccacgccggaggaagagcgtgaag
actggccagagcgactcagactcaggcgccgagctgggccaccacccgagcggtgccatc
tacaagactgacgccggcctcggtgacgcacaccaccacggtgaccacacagggcagacc
catgggccgcccaccccccccaccacccccaagactgacctgcaccacgggggcaagcag
gagctgaagctggaaggccgccgcctggtggacagcgggcgccagaacatcgacttcagc
aacgtggacatctctgagctgagcagtgaggtcatcggaaacatggacacctttgacgtc
cacgagttcgaccagtacctgcccctcaacggccactcggccctgcccacagagccgggc
cagcccgcggccgccagctcctacggaggcacctcctactcgcactccggggcggctggc
atcggggcatcccccgtgtgggcccacaagggagccccatcggcctctgcgtcgcccact
gaggcagggcccccgaggccgcacatcaagacggagcagctgagccctggccactacggc
gaccagtcgcatggctctccggggcacaccgactacggctcctacagtgctcaggccagt
gtcaccacggccgcctccgccgtggccgccagctccttcaccagctcacagtgcgactac
accgacctgcaggcccccaactactatggcccgtaccccggctacccatccggcctctac
cagtacccctacttccactcgccccgccgaccctacgcctcgcccctgctcggtggcctc
tccgtgccgcccgcccacagcccccccagtaactgggagcagcccgtgtacaccaccctg
accagaccctga
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