Physeter catodon (sperm whale): 102979668
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Entry
102979668 CDS
T06011
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X28
KO
K14946
RNA binding protein fox-1
Organism
pcad
Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102979668 (RBFOX1)
Spliceosome [BR:
pcad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102979668 (RBFOX1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
102979668
NCBI-ProteinID:
XP_007125914
Ensembl:
ENSPCTG00005005491
UniProt:
A0A2Y9FNC2
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All DBs
Position
14:52231143..52627079
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AA seq
418 aa
AA seq
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MLPSQGVLLHPYGVPMIVPAAPYFPGLIQGNQEAAAAPDTMAQPYASAQFAPPQNGIPAE
YTAPHPHPAPEYTGQTTVPEHTLNLYPPAQSHSEQSAADTSAHTVSGTATQTDDAAPTDG
QPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF
VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYS
PEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRGRTVY
NTFRAAAPPPPIPAYGGVVYQEPVYGNKLLQGGYAAYRYAQPTPATAAAYSDSYGRVYAT
DPYHHTLAPAPTYGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttctcaaggagtcctcctgcatccctatggcgtgcctatgattgttccagca
gccccctacttccccggactgatccagggtaatcaggaagcagcagctgcccctgacaca
atggctcagccttacgcttcggcccagtttgccccccctcaaaacggcatccccgcggaa
tacacggcccctcatccccaccccgcgccagagtacacgggccagaccaccgttcccgag
cacacgttaaacctgtaccctcccgcgcagtcgcactcggagcagagcgcagcggacaca
agcgcgcacaccgtctcgggcaccgccacacagacagatgatgcggcgcccacggatggt
cagccccagacacaaccttccgaaaatacggaaaacaagtcccagcccaagaggctgcac
gtctccaacatccccttcaggttccgggatcccgacctccgacaaatgtttggccaattt
ggtaaaatcttagatgttgaaattatttttaatgagcgaggctcaaagggatttggtttc
gtaactttcgaaaatagtgccgatgcggacagggcgagggagaaattacacggcaccgtg
gtagagggccgtaaaatcgaggtaaataatgccacagcacgtgtaatgacaaataaaaag
actgtcaacccttatacaaatggctggaaattgaatccagttgtgggtgcagtgtacagt
cccgaattctatgcaggcaccgtgctgttgtgccaggcaaaccaggagggatcttccatg
tacagtgcccccagttcacttgtatatacctccgcaatgcccggcttcccgtatccagcc
gccaccgccgcggccgcctaccgaggggcgcacctgcgaggccgcggccgcaccgtgtac
aacaccttccgggccgcggcgcccccgcccccgatcccggcctacggcggagtagtgtat
caagagcctgtgtatggcaataaattgctgcagggtggttacgctgcatatcgctacgcc
cagcccacccctgccactgctgctgcctacagtgacagttacggacgagtttatgctacc
gacccctaccaccacacacttgctccagcccccacctacggcgttggtgccatgaatgct
tttgcacccttgactgatgccaagactaggagccatgctgatgatgtgggtctcgttctt
tcttcattgcaggctagtatataccgagggggatacaaccgttttgctccatactaa
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