Physeter catodon (sperm whale): 102981001
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Entry
102981001 CDS
T06011
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03022
Basal transcription factors
pcad03420
Nucleotide excision repair
pcad05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102981001 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
102981001 (GTF2H4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102981001 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102981001 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102981001 (GTF2H4)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102981001 (GTF2H4)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102981001 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
102981001
NCBI-ProteinID:
XP_007106406
Ensembl:
ENSPCTG00005009031
UniProt:
A0A2Y9EPR2
LinkDB
All DBs
Position
18:complement(85432457..85438062)
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AA seq
463 aa
AA seq
DB search
MESTPSRGGLNRVHLQCRNLQEFLGSLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSAEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGG
TAHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLVFENSAKRLMVVTPAGHGDVKRFWKRQKHNS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaccccttccaggggtggactgaatcgagtacacctacaatgcaggaatctg
caggaattcctagggagcctgagccctggggtattggaccgattgtatgggcaccctgcc
acctgtctggctgtcttcagggagctcccatctttggctaagaactgggtgatgcggatg
ctctttctggagcagcctttgccacaagctgctgtagccctgtgggtgaagaaggaattc
agcaaagctcaggaggaaagcacggggctgctgagcggcctccgtatctggcacacgcag
ctgctccctggtggtctccagggcctcatcctcaaccccatattccgccaaaacctccgc
attgcccttctgggtgggggtaaggcctggtctgatgacacaagtcagctgggaccagac
aagcacgcccgggatgtcccctcacttgacaagtatgccgaggagcgatgggaggtggtc
ctgcacttcatggtgggatcccccagcgcagccgtcagccaggacttggctcagctcctt
agccaggctgggctcatgaagagtgctgaacctggagagccaccctgcattacctctgcc
ggcttccagttcctgttgctggacaccccggcccagctctggtactttatgttgcagtat
ctgcagacagcgcagagtcggggcatggacctagtggagattctctcctttctcttccag
ctcagcttctctactctgggcaaggattactctgtggaaggtatgagtgattctctgttg
aacttcctgcaacatctgcgtgagtttgggcttgttttccagaggaagaggaaatcgcgg
cgttactaccccacgcgactggccatcaatctctcgtcaggtgtttctggggctgggggc
actgcgcatcagcctgggttcattgtcgtggaaaccaattaccggctgtatgcctacacg
gagtcggagctgcagatcgccctcattgcccttttctctgagatgctctatcgcttcccc
aacatggtggtggcacaggtgacccgggagagcgtgcagcaggccattgctagtggcatc
acagcccaacagatcatccatttcctaaggacaagggcccacccagtgatgcttaaacag
acacctgtgctgccccccaccatcacggaccagattcggctgtgggagctggaaagggac
agactccggttcaccgaaggcgtcctgtataaccagttcctgtcgcaagtggactttgag
ctgctgctggcccacgctcgggagctgggcgtcctggtgttcgagaactcggccaagcgg
ctcatggtggtgaccccggccgggcacggcgacgtcaagcgcttctggaaacggcagaag
cacaactcctga
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