Physeter catodon (sperm whale): 102983501
Help
Entry
102983501 CDS
T06011
Symbol
CHM
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1 isoform X1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
pcad
Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcad01006
]
102983501 (CHM)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102983501 (CHM)
Prenyltransferases [BR:
pcad01006
]
Protein prenylation
Rab geranylgeranyltransferase
102983501 (CHM)
Membrane trafficking [BR:
pcad04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102983501 (CHM)
Endosome - Lysosome transport
Rab GTPases and associated proteins
102983501 (CHM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDI
NAD_binding_8
FAD_oxidored
Motif
Other DBs
NCBI-GeneID:
102983501
NCBI-ProteinID:
XP_023985263
Ensembl:
ENSPCTG00005018395
UniProt:
A0A2Y9T4L3
LinkDB
All DBs
Position
21:complement(61693211..61882237)
Genome browser
AA seq
653 aa
AA seq
DB search
MADNLPSEFDVVVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLK
EHQENSDIVNECPLWQEKILENEESIALSRKDKTIQHVEVFCYASQDLHEDVEEAGALQK
NHASVTSANSTEAAHSACLPAEDQSLSTASCEIPTEQTPSSDPESALEVNDFEATGEKEI
HCDDKTCVPSTSEKETSENVPMAEDTAEQPKKNRITYSQIIKEGRRFNIDLVSKLLYSRG
LLIDLLIKSNVSRYAEFKNITRILAFREGRVEQVPCSRADVFNSKQLTMVEKRMLMKFLT
FCMEYEEHPDEYKAYEEITFSEYLKTQKLTPNLQYFVLHSIAMTSETASSTIDGLKATKN
FLHCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHLVQCLVVDKESGKCKAII
DQFGQRIISKHFLVEDSYFSENTCSHVQYRQISRAVLITDRSVLKTDSDQQISILTVPAE
EPGAFAVRVIELCSSTMTCMKGTYLVHLTCTTSKTAREDLEPVVQKLFTPYTEKEIENEE
VEKPRLLWALYFNMRDSSDVSRNSYNDLPSNVYVCSGPDCALGNDNAVKQAEALFQQICP
NEDFCPPPPNPEDIILDGDSLQPEASESSAIPEANSETPRESANLRNPEEPSK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggataatctaccttcggagtttgatgtggtcgtaatagggacgggtttgcctgaa
tccatcattgcggctgcatgttcaagaagtggccagagggttctgcatgttgattcaaga
agctactatggaggaaactgggccagttttagcttttcaggactgttgtcctggctaaag
gaacaccaggaaaacagtgatattgtaaatgaatgcccactgtggcaagagaagatcctt
gaaaatgaagaatctattgctcttagcaggaaggacaaaaccattcaacatgtggaagtg
ttttgttatgccagtcaggatttgcatgaagatgtcgaagaagctggtgcactgcagaaa
aatcatgcttctgtgacatctgcaaactccacagaagctgcacattctgcctgcctgcct
gcagaagatcagtcattaagtactgcaagctgtgaaatacccacagaacaaactccaagc
agtgatcccgagagtgccctagaagtaaatgattttgaagcgacaggggagaaagaaatc
cattgtgatgataaaacttgtgtgccctcaacttcagaaaaggaaacaagtgaaaatgtg
cctatggccgaagacaccgcagagcaaccaaagaaaaataggattacttactcgcaaatt
attaaagaaggcaggagatttaatattgatttggtatcaaagctgttgtattctcgagga
ttgctaattgatcttctaatcaaatctaatgttagtcgatatgcagagtttaaaaatatt
accaggattcttgcttttcgagaaggaagagtggaacaggttccttgctccagagcagat
gtctttaatagcaaacaacttactatggtagaaaagcgaatgctaatgaagtttctcaca
ttttgtatggagtatgaggaacatcctgatgaatataaagcctatgaggaaattacattt
tctgaatatttaaaaactcagaaattgacccccaacctccaatattttgtcctacattca
attgcaatgacatcagagacagccagcagtactatagatggtctcaaagctaccaaaaac
tttcttcactgtcttgggcggtatggcaacactccatttttgtttcctttatatggccaa
ggagaactccctcagtgtttctgcaggatgtgtgcggtgtttggtggaatctattgtctt
cgccatttggtacagtgccttgtcgtggacaaagaatctggaaaatgtaaagcaatcata
gatcagtttggtcagagaataatctctaagcatttccttgtggaagacagttacttttct
gagaacacatgctcgcatgtgcaatacaggcagatctccagggcagtcttgattacggat
aggtctgtactaaaaacagattcagatcaacagatttccattttgacagtgccagcagaa
gaaccaggagcttttgctgttcgggtcattgagttatgttcctcaacaatgacatgcatg
aaaggcacatatttggttcatttgacttgtacgacttctaaaacagcaagagaagattta
gaaccagttgtgcagaaattgtttactccatataccgaaaaggagatagaaaatgaagaa
gttgaaaagccaagacttctgtgggctctttacttcaatatgagagattcttcagacgtc
agcaggaactcttataatgatttaccatccaacgtttatgtctgctctggcccagactgt
gctttaggaaatgataatgcagtcaaacaggctgaagcacttttccaacaaatctgcccc
aacgaagacttctgtccacccccaccaaatcctgaagacattatccttgatggagacagt
ttacaaccagaggcttcagaatccagtgctataccagaggccaactcagagactcccagg
gaaagcgcaaatctgagaaacccagaggagccctctaaataa
DBGET
integrated database retrieval system
