Physeter catodon (sperm whale): 102989906
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Entry
102989906 CDS
T06011
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X3
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04015
Rap1 signaling pathway
pcad04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
102989906 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102989906 (RAPGEF6)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
RA
cNMP_binding
PDZ_6
PDZ_2
Tcp10_C
Motif
Other DBs
NCBI-GeneID:
102989906
NCBI-ProteinID:
XP_023971748
Ensembl:
ENSPCTG00005003573
UniProt:
A0A2Y9RZI8
LinkDB
All DBs
Position
8:complement(127932175..128153991)
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AA seq
1409 aa
AA seq
DB search
MNSPVDPGARQALKKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSG
NQVLFCSETIARCWYILLSGSVLMKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARQSRRRFRKINCKGERQTITDDVDINNYLSLPADLTKMHIADSPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEDEEI
DRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEV
VEQAGAIILEDGQELDSWYVILNGTVEISHPDGKVENLFMGNSFGITPTLDKQYMHGVVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLESPLDVGTKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFSLNGGSEKAFGIFVEGVEPGSKAADAGLKRGDQIMEVNGQNFENITFVKALEILRN
NTHLALTVKTNIFVFKELLTRTEQEKSGVPHIPKIAEKKSNRHSIQDVPGDIEQTSQEKG
NKKIKANTVSGGRNKIRKILDKTRFSILPPKLFSDVGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIICKDTTAKEVVCQA
IHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELIKESQLSILQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLDSKTGNTHL
KEFEDIVNQETFWVASEILTESNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLA
SVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDM
TFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAVMFRQRSLSQGSTNSNMLD
VQGGAHKKKARRSSLLNAKKLYEDAQMARKVKQYLSSLDVETDEEKFQMMSLQWEPAYGT
LTKNLSEKRSVKSSEMSPVPVRSAGQAAKAHLHQPHRVSQVLQVPAVNLHPIRKKGQAKD
PATLSTSLPQKVLGTTEEISGKKHTEDTISMASSLHSSPPASPQGSPRKVGSIISDHSIL
LRLSGSSSSPPRESSTKISGHSCPGIGGVYLQKKIQQITRSTAKRTDRTEKATEENRDRT
ICENTARKRMTSPFRRFRERTLSRERLANSKKEDADLNQATESCEKVKDVGSNIKDEKGN
DIFNSNSRGNSNTLNCFYTRFKSKRRKTL
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacccgtggaccctggagctaggcaggcgctgaagaagaagccgcccgagcgg
acgcccgaggacttaaatactatttattcttatcttcatggaatggaaatattatcaaat
ctcagggaacatcagcttagattaatgtctgcaagagcacgctatgagagatacagtggc
aatcaagttcttttttgttcagaaactattgccagatgttggtatatcctgctttctgga
tctgtgcttatgaaagactccatggttttgcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagagccttcagaaatgattgtggtagagaat
tccaaagataatgaagatagtattctacaaagagaaattcctgccagacagtctcgacga
cggtttcggaaaattaactgtaaaggagaacgccaaactattactgatgatgtggacatt
aacaactatctttctcttccagccgatcttaccaagatgcacattgcagacagccctcat
ccacaggtgactcatgtgtcttctagtcagtctggttgtagcattgccagtgactctggg
agcagcagtttatcagatatctatcaggctacggaaagtgaggtaggagatgtagattta
acacgtcttccagaaggacctgttgattctgaagatgaagaagaggaagatgaagagatt
gatcgaacagatccactgcaggggcgagatcttgttcgagaatgtcttgaaaaagaacct
gcagacaaaactgatgatgacattgaacaattactggagtttatgcaccagcttcctgct
tttgcaaacatgaccatgtctgtaaggagagaactctgctcagtgatgatttttgaagtg
gtggagcaggctggagctattattcttgaagatgggcaagagcttgactcatggtatgtt
attttaaacggcactgtagaaattagtcatccagatggaaaagttgaaaatctctttatg
ggaaatagttttggaattacacccactctggataagcagtacatgcatggagttgttagg
actaaagtagacgattgtcagtttgtctgcatagcccagcaggattattggagaatttta
aatcatgtggaaaaaaatacccataaagttgaggaagagggagaaattgttatggtacat
gagcaccgtgaactagatcgcagtggaaccaggaaaggacacattgtaatcaaggcaaca
cctgaacgtctcatcatgcatttaatagaagagcattccattgtggacccaacttatata
gaagatttcctattaacttatagaacatttcttgaaagtcctttggatgttgggaccaaa
ctattggaatggtttaaaattgacagcttaagggataaggtaacacggattgtattatta
tgggtaaataatcattttaatgattttgaaggtgatcctgctatgactcgatttctggag
gaatttgaaaaaaatctggaagatacaaaaatgaatggtcatctccggttattgaatatc
gcctgtgctgcaaaggctaagtggagacaggttgtgctgcaaaaggcttcccgggagtcc
cctctgcatttcagcctaaatggaggaagtgagaaggcatttggtatttttgttgaaggt
gtagaacctggtagcaaagctgctgatgcaggactgaaacgtggtgatcagataatggaa
gtaaatggacaaaactttgagaatataacgtttgtgaaggcccttgaaattttgaggaat
aatactcatcttgcacttactgtaaagaccaacatttttgtgttcaaagagttacttact
aggaccgaacaagagaaatctggtgttcctcatattcccaaaattgctgaaaaaaaaagt
aatcgccactcaatccaggatgtaccaggagatattgaacagacatcacaggagaaaggg
aacaagaaaataaaagcaaatactgtttcaggtggaagaaacaaaatcaggaagattttg
gataaaacacgatttagtatcttgcctccaaaactgtttagtgatgtaggcctgagccaa
tcacaggacgacagcattgtgggaacaagacactgtaggcacagtttggccataatgcct
atccctggaacactctcatccagcagccccgacctcctgcagcctaccaccagcatgttg
gatttttctaatccctcagatattcctgatcaagttataagagttttcaaagcagatcaa
caaagttgctacattatcatctgtaaagacactacagctaaagaagttgtttgtcaagct
attcatgaatttggtttgactggtgcatctgacacatattctctctgtgaagtttctgtt
actcctgagggtgtcataaaacagaggagacttccggaccagttctccaaattagctgat
agaattcagctcaatggaaggtattatttaaaaaataacatggaaacagaaaccctgtgt
tcggatgaagatgctcaagaactaattaaggaaagccaactatccatactgcagctcagt
actattgaggtggccactcagctgtcaatgagggactttgatttatttcgtaatattgag
cctactgaatatattgatgacctttttaagttagattcaaaaacaggaaatacccacttg
aaagaatttgaagatattgtaaaccaagagacattctgggtggcctcagagattttaact
gaatcaaatcagctcaaacgaatgaagattattaaacattttattaaaattgcacttcat
tgtcgagaatgtaagaacttcaattccatgtttgcaataataagtggcttgaacctggca
tctgtagcacgactcagaggtacttgggaaaagttaccaagcaagtatgagaaacacctc
caagatctacaagacctttttgatccatctagaaacatggcaaaatatagaaatattctt
agtagtcaaagcatgcagcctccaattattccactcttccccgttgtcaagaaagatatg
acatttctacatgaaggaaatgattccaaagtagatggtttagtaaattttgagaagctc
agaatgattgccaaggaaattcgtcaagttgttcgaatgacttctgctaacatggaccca
gctgtgatgttccgacagaggtcactgagtcaaggcagcacaaattcaaacatgctggat
gttcagggaggtgctcacaaaaaaaaggcacgccgtagctctctgcttaatgctaagaag
ctgtacgaagatgcccaaatggcaaggaaagtgaagcaatatctttccagtctggatgta
gaaacagatgaggagaagttccagatgatgtcattgcaatgggagcctgcatatggtacc
ttgaccaagaatctaagtgaaaaaagatcagtcaagtcatcagaaatgtctccagtgcct
gtgaggtcagctggccaagcagctaaagcccatttgcatcagccccacagagtgagccag
gtgcttcaggtgccagctgtaaatttgcaccccatcaggaagaagggacaagcaaaagac
cctgccacactgagtacaagtttacctcagaaagttttaggaacaactgaagaaataagt
ggtaagaaacatacagaagacactatttctatggcatcatccttacattctagtcctcct
gcgtctcctcaaggttcccctcgcaaagttggcagtatcatatctgatcacagcatcctg
ctgcgcctctcagggtcttcctcatcccctccccgtgagtccagcaccaagatcagtggc
cacagctgccccggaataggtggggtttacttgcaaaagaaaatccaacagattaccagg
agcacagccaaaagaacagacaggaccgagaaggccactgaggagaatagagacaggaca
atttgtgagaacacagccagaaaaagaatgacatccccgtttagaagatttagggaaaga
actctttcaagggagagactagccaacagcaaaaaagaggacgcagatctcaatcaagct
acagaaagctgtgagaaagtgaaggatgttggaagcaacatcaaagatgagaaagggaat
gacatcttcaattcaaatagccgaggcaacagtaacactttaaactgcttctatacgcga
ttcaagtctaaaaggagaaagacactctga
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