Physeter catodon (sperm whale): 102991897
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Entry
102991897 CDS
T06011
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41 isoform X1
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102991897 (DDX41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102991897 (DDX41)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102991897 (DDX41)
Spliceosome [BR:
pcad03041
]
Complex C
Other components
Complex C specific factors
102991897 (DDX41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
UTP25
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
102991897
NCBI-ProteinID:
XP_007102959
Ensembl:
ENSPCTG00005020658
UniProt:
A0A2Y9EIC9
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MEESDPERKRARTDEATATGSRSEADDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAE
EEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
KSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
MQTKQVSNIGRKDYLAHSSMDF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatcggaccccgagcggaagcgggctcgcaccgacgaggcgactgccacagga
agccgctccgaggcagacgatgaggacgacgaggactacgtgccgtacgtgccgttgcga
cagcgccggcaactgctgctccagaagctgctgcagcgaaggcgcaagggagctgcagaa
gaggagcagcaggacagcggcagcgagccccggggagatgaggacgacatcccgttgggc
cctcagtccaacgtcagcctcctggatcagcaccagcacctcaaagagaaggctgaagcc
cgcaaggagtctgccaaagagaagcagctgaaggaagaggagaagatcctggagagtgtg
gctgagggtcgagccttgatgtcagtgaaggagatggctaagggaatcacatatgatgat
ccaatcaaaactagttggacaccaccccgttacgtcttgagcatgtctgaagagcggcat
gagcgtgtacggaagaagtaccacattttggtggaaggagatggtatcccgccacccatc
aagagcttcaaggaaatgaaatttcctgcagctatcctgagaggcctgaagaagaagggc
atccaccacccaacacccattcagatccagggaattcccaccattctatctggccgtgac
atgataggcatagccttcacgggttcaggcaagacactggtgttcactttgccggtcatc
atgttctgcctggagcaagagaaaagattacctttctctaagcgtgaagggccctatgga
ctcattatctgcccctcgcgggagctggcccggcagacccacggcatcctggagtattac
tgccgcctactgcaggaggacagctcgccactcctgcgctgcgctctctgcattgggggc
atgtccgtcaaagagcagatggagaccatccgacatggtgtgcacatgatggtggccacc
cctgggcgcctcatggatctgctgcagaagaagatggtcagcctggatatctgtcgttac
ctggccctggacgaggctgaccgcatgatcgacatgggttttgagggtgacatccgtacc
atcttctcctacttcaagggccagcgacagaccctactctttagtgccaccatgcctaag
aagattcagaactttgccaagagtgccctggtaaagcctgtcacgatcaatgtggggcgt
gctggggctgccagcctggatgtcatccaggaagtggaatatgtgaaggaggaagccaag
atggtgtacctgcttgagtgcctgcagaagacaccgccgcccgtgctcatctttgcggag
aagaaagcagatgtggacgccatccatgagtacctgctcctcaagggggtcgaggctgtg
gccatccatgggggcaaagaccaagaggaacggaccaaggccatcgaggcgttccgggag
ggcaagaaggatgtcctagtggccacagacgtagcctccaagggcttggacttccctgcc
atccagcacgtcatcaattatgacatgcctgaggagatcgagaactatgtgcaccgtatc
ggccgcactgggcgctcaggaaacacaggcattgccaccaccttcatcaacaaggcctgt
gacgagtcggtgctgatggatcttaaagccctgctgctggaggctaagcagaaggttcca
cccgtgctgcaagtactgcactgcggggacgagtccatgctggacattggaggagagcgt
ggctgtgccttctgtgggggcctgggccatcggatcaccgactgccccaaactcgaggct
atgcagacgaagcaggttagcaacatcggccgcaaggactacctggcccacagctccatg
gacttctga
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