KEGG   Physeter catodon (sperm whale): 102991897
Entry
102991897         CDS       T06011                                 
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41 isoform X1
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
pcad  Physeter catodon (sperm whale)
Pathway
pcad04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    102991897 (DDX41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcad03041]
    102991897 (DDX41)
Enzymes [BR:pcad01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102991897 (DDX41)
Spliceosome [BR:pcad03041]
 Complex C
  Other components
   Complex C specific factors
    102991897 (DDX41)
SSDB
Motif
Pfam: DEAD Helicase_C zf-CCHC ResIII UTP25 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 102991897
NCBI-ProteinID: XP_007102959
Ensembl: ENSPCTG00005020658
UniProt: A0A2Y9EIC9
LinkDB
Position
Unknown
AA seq 622 aa
MEESDPERKRARTDEATATGSRSEADDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAE
EEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
KSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
MQTKQVSNIGRKDYLAHSSMDF
NT seq 1869 nt   +upstreamnt  +downstreamnt
atggaggaatcggaccccgagcggaagcgggctcgcaccgacgaggcgactgccacagga
agccgctccgaggcagacgatgaggacgacgaggactacgtgccgtacgtgccgttgcga
cagcgccggcaactgctgctccagaagctgctgcagcgaaggcgcaagggagctgcagaa
gaggagcagcaggacagcggcagcgagccccggggagatgaggacgacatcccgttgggc
cctcagtccaacgtcagcctcctggatcagcaccagcacctcaaagagaaggctgaagcc
cgcaaggagtctgccaaagagaagcagctgaaggaagaggagaagatcctggagagtgtg
gctgagggtcgagccttgatgtcagtgaaggagatggctaagggaatcacatatgatgat
ccaatcaaaactagttggacaccaccccgttacgtcttgagcatgtctgaagagcggcat
gagcgtgtacggaagaagtaccacattttggtggaaggagatggtatcccgccacccatc
aagagcttcaaggaaatgaaatttcctgcagctatcctgagaggcctgaagaagaagggc
atccaccacccaacacccattcagatccagggaattcccaccattctatctggccgtgac
atgataggcatagccttcacgggttcaggcaagacactggtgttcactttgccggtcatc
atgttctgcctggagcaagagaaaagattacctttctctaagcgtgaagggccctatgga
ctcattatctgcccctcgcgggagctggcccggcagacccacggcatcctggagtattac
tgccgcctactgcaggaggacagctcgccactcctgcgctgcgctctctgcattgggggc
atgtccgtcaaagagcagatggagaccatccgacatggtgtgcacatgatggtggccacc
cctgggcgcctcatggatctgctgcagaagaagatggtcagcctggatatctgtcgttac
ctggccctggacgaggctgaccgcatgatcgacatgggttttgagggtgacatccgtacc
atcttctcctacttcaagggccagcgacagaccctactctttagtgccaccatgcctaag
aagattcagaactttgccaagagtgccctggtaaagcctgtcacgatcaatgtggggcgt
gctggggctgccagcctggatgtcatccaggaagtggaatatgtgaaggaggaagccaag
atggtgtacctgcttgagtgcctgcagaagacaccgccgcccgtgctcatctttgcggag
aagaaagcagatgtggacgccatccatgagtacctgctcctcaagggggtcgaggctgtg
gccatccatgggggcaaagaccaagaggaacggaccaaggccatcgaggcgttccgggag
ggcaagaaggatgtcctagtggccacagacgtagcctccaagggcttggacttccctgcc
atccagcacgtcatcaattatgacatgcctgaggagatcgagaactatgtgcaccgtatc
ggccgcactgggcgctcaggaaacacaggcattgccaccaccttcatcaacaaggcctgt
gacgagtcggtgctgatggatcttaaagccctgctgctggaggctaagcagaaggttcca
cccgtgctgcaagtactgcactgcggggacgagtccatgctggacattggaggagagcgt
ggctgtgccttctgtgggggcctgggccatcggatcaccgactgccccaaactcgaggct
atgcagacgaagcaggttagcaacatcggccgcaaggactacctggcccacagctccatg
gacttctga

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