Paraburkholderia caffeinilytica: DSC91_006329
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Entry
DSC91_006329 CDS
T06448
Name
(GenBank) polymerase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf00540
Lipopolysaccharide biosynthesis
pcaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DSC91_006329
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcaf01005
]
DSC91_006329
Enzymes [BR:
pcaf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
DSC91_006329
Lipopolysaccharide biosynthesis proteins [BR:
pcaf01005
]
Core region
DSC91_006329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
AXL53066
LinkDB
All DBs
Position
2:complement(3172224..3173522)
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AA seq
432 aa
AA seq
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MIFAPSLVWLSTALLFFAPAVNLVWRGGTGYCFFVILALALGAAVANRRTPGYFSGLRTY
RWYTIGMLAFIVAIAVQQALLGYWLPRQFDALSRFMLALPVFLLLRQLPSRHLRMIGWGC
AAGALAAGIWALVDQPAGGWTDANRLNNSYTNAIPFGDTALLLGFLSVFTMGWDKPRDWR
VLGLRLLALVGGGYASYLSGSRGGWLAVPVFVVLLGLQYQWYAHKKRFLITTLAIVIGAG
ALLSTERVQKRLAEVPNDVSMMHQGEDYTSVGLRLQLWNASRLIFTRHPVYGVGKGRLVD
ELGVLAKRGEVKSQIVNERAHSDFFSTLAEMGAVGVICLLLFYYGISVYFWRHRRSGDPA
IRAASYAGLAVATSTVIFGLTIDVLVPIMVTVLLALLVATFLAVIDARKRELAAAQPAGS
PSARQTAAGVKA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgctcccagtctggtctggctcagcacagccctgctgtttttcgcacccgcg
gtcaatctcgtatggcgcggcggcacgggctactgcttcttcgtcattctcgcgttggcg
ctcggcgccgccgtggccaaccggcgcacgccgggatacttctccggattgcgcacttac
cgctggtacacgatcggcatgctggcttttatcgtggcaatcgccgtccagcaggcgctg
ctcggttattggctgccgcgtcagttcgacgcattgtcgcgcttcatgcttgccctgcca
gtcttccttctgctgcggcaattgccttccaggcatctgcgcatgatcggctggggttgt
gccgccggcgcgctggcggccggcatctgggcactcgtcgatcaacccgccggcggctgg
acggatgcgaatcgtctgaataattcctatacgaatgcgattccgttcggcgataccgcg
ctgctgctcgggttcctgtcggtcttcaccatgggctgggacaagccgcgcgactggcgt
gtgctggggcttcgactgctggcgctggtgggcggcggctacgcgtcctatctgtcgggc
agccggggcggctggctggccgtgcccgtgtttgtcgtgctgctcggcttgcagtaccag
tggtacgcacacaagaagcgtttcctgataacgacgctggcgatcgtgatcggcgcgggg
gcgctcctgtcgaccgagcgggttcagaaacgcctcgccgaagtaccgaacgatgtgtcg
atgatgcatcagggcgaagactacacatcggtaggcctgcgccttcagttgtggaatgcg
tcgcggctgatctttacgcgtcatccggtgtacggcgtcggcaaggggcgtctggtggac
gagctgggtgtgctggccaagcgtggcgaagtgaagagccagatcgtcaacgagcgcgcc
catagcgactttttctcgaccctcgccgagatgggcgcggtcggcgtgatctgcctgttg
ctgttctactacggcatctcggtgtacttctggcgtcaccggcgctcgggcgacccggcg
attcgcgcggcgtcctatgcaggtctggcggtcgccaccagcacggtgattttcgggctg
accatcgacgtcctcgtgccgatcatggtgacggtactgctcgcgctactggtcgccacg
tttctcgcggtgatcgatgcgcgcaagcgtgaacttgccgcggcgcaaccggccggatcg
ccttcggcccgccaaaccgctgccggcgtcaaggcctga
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