Parageobacillus caldoxylosilyticus: BV455_03099
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Entry
BV455_03099 CDS
T07489
Symbol
sigF_2
Name
(GenBank) RNA polymerase sigma-F factor
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
pcal
Parageobacillus caldoxylosilyticus
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcal03021
]
BV455_03099 (sigF_2)
Transcription machinery [BR:
pcal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BV455_03099 (sigF_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_3
KORA
HTH_37
HTH_31
MarR_2
HTH_Crp_2
HTH_28
DUF134
Motif
Other DBs
NCBI-ProteinID:
QXJ39733
LinkDB
All DBs
Position
2969281..2970033
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AA seq
250 aa
AA seq
DB search
MDVDVKQDQSQIKDHEMKELIRRSQQGDQEARDEIIEKNMRLVWSVVQRFLNRGYEPDDL
FQIGCIGLLKSVDKFDLSYDVKFSTYAVPMIIGEIQRFIRDDGTVKVSRSLKEMGNKIRK
AKDELAKKHGRAPTVTEIAGYLEISPEDVVLAQEAVRSPASIHETVYENDGDPITLLDQI
ADSDEVSWFDKIALKKAIEELDERERLIVYLRYYKDQTQSEVASRLGISQVQVSRLEKKI
LQQIKERMDG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgatgtcaagcaagatcagtcgcaaatcaaagatcatgaaatgaaggagctg
attcgtcgcagccaacaaggggaccaagaggcgcgcgatgaaattattgaaaaaaacatg
cgcctcgtttggtccgtcgtccagcgttttttaaaccgcggttatgagccggacgattta
tttcagattggctgcatcggcttgctcaagtctgttgataagtttgatttgtcgtatgat
gtgaagttttccacctatgcggtgccgatgatcatcggtgaaattcagcgttttattcgc
gatgacggaacggtaaaggtgagccgttccttaaaagagatggggaataaaatccgcaag
gcgaaagacgagcttgcaaaaaagcatgggcgggcgccgacagtgacagaaatcgccggt
tatttggaaatttccccggaagatgttgtgctcgcccaagaggcggtccgttctcccgct
tcgattcatgagacggtatatgaaaacgacggcgatccgattacgcttcttgaccaaatc
gccgattccgacgaagtttcgtggtttgataaaatcgcgctaaaaaaagcgattgaggaa
cttgatgaacgggagcggctcattgtctatttgcgctattacaaagaccagacccaatca
gaagtggcatctagattaggcatctctcaagtgcaagtatcccggcttgaaaaaaaaata
ttgcagcaaataaaagagagaatggatggatag
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