Pomacea canaliculata (golden apple snail): 112564153
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Entry
112564153 CDS
T05881
Name
(RefSeq) RING finger protein nhl-1-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112564153
04121 Ubiquitin system [BR:
pcan04121
]
112564153
Enzymes [BR:
pcan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112564153
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112564153
Ubiquitin system [BR:
pcan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112564153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
SGL
zf-C3HC4
zf-RING_UBOX
Lactonase
zf-C3HC4_2
zf-RING_2
Phytase-like
TolB_like
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_11
Apolipoprotein
Laminin_II
DUF6690
Motif
Other DBs
NCBI-GeneID:
112564153
NCBI-ProteinID:
XP_025094556
LinkDB
All DBs
Position
LG5:21455707..21461906
Genome browser
AA seq
868 aa
AA seq
DB search
MADTEMSYSAEHIQRLLQCSVCLDRFKQPKLLPCQHTFCLSPCLEGLVDRLTRIVRCPEC
RADHVVPRGGPSYFPNNLTIISFLELPPLQGERNEPAPPRNVPQGAPVSSPRLAAGGILG
TSRSVLGRIAFDMAGSAVGGGCNVCHSDGRIMRCGHCDLLVCEGCKRGHMDQVRGDVNRL
VSQVRRQLPQITEQINMISRKETQLQARCEIVKNEISEAIERHVRELTSRERIMREDVDT
FLLGELRNLRTHQENLEVELASMASFCDTTESILSRDRHLTDGDLVELKRQCVEHIEILR
DYENGTLRPPLPRNIQLSSESQFLSTTIGNFGDLIITSGTGAVRALDQTRNAETSEGNSR
SERRTTLRPPETATDYVLSVLNPRASSLSPAVTRRHRSPGRSTQSAVQTPARSAQILSND
DLYEEEDDVPPPPSHLRRRPRREHHSDTRIAGLMNGDGEHSLSQLQQSRARHLSLGALPP
SSETSEQTESSVERESPERIAPARQRSAAAQNSDNMVPVGIGMAPSLTYPPRHSVRQPLR
FDISLNSLEPDSADEHSSGSEAGLHTFMRSTNSPSIYVTTPRNKYNQKGQAMIRFGERGN
AERQFTWPRGVAVSPLDDNVYVADSSNHRVQIFDNTGCYIRSFGRYGQGEGEFDCLAGIT
VNGLGQVIIADRYNHRIQIFDRNGSFQSAFGSEGINDGQLNYPWGIACDNMGFIYVCDKE
NHRVQVFQSNGSFVRKFGRLGNGTGHFDNPHYVAVSPDNKVYVSDSSNHRIQVFSIYGDF
LFSFGTSGTLRGQMKFPRGIAIDNQGFVVVADSGNNRVQIFRADGRYYSMFGGWGSENGQ
FKGLEGIAILANGNVVVSDRENHRIQIF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacagagatgtcatattctgctgagcacatccaacgcttgctgcaatgttca
gtttgcctggatcgttttaaacagcccaaacttctgccatgtcaacacaccttttgcctc
agtccatgtctagaaggtcttgtagatcgcctgactagaatagtccggtgcccagaatgt
cgagctgaccatgttgtaccccgtggtggtccatcatattttcccaacaatctcacaatc
atcagtttcttggaattaccaccattgcaaggtgagcgaaacgaacctgcaccaccacgg
aatgtgcctcaaggagctcctgtttcatctcctcgccttgctgctggtggaattcttggt
acctcaagatctgttttaggaaggattgcatttgatatggctggtagtgctgttggtggt
ggttgtaatgtttgccactctgatggccgcatcatgaggtgtggtcactgtgacttgcta
gtatgcgaagggtgcaagcgtggtcacatggatcaagtccgaggagatgtgaaccgtctg
gtgagtcaggttcgtcgccagcttccacagataacggagcagatcaacatgatcagcaga
aaagaaactcaacttcaggccagatgtgaaattgtgaaaaatgagatttcagaggcaatt
gaaagacatgtaagagagttaacctccagggagagaataatgcgagaggatgtggacact
ttccttcttggagagcttcgtaatcttcgtacacaccaagaaaacctagaagtggagttg
gctagcatggcaagcttttgtgatacaactgaatccatattgagccgtgaccgacacctc
acagatggtgatttagtagagctgaaaaggcagtgtgtagaacacatagaaatattaaga
gattacgaaaatggaactttaagacctccacttccgcgaaatattcaactttcttctgaa
agccagtttctttccacaacaataggaaactttggagaccttatcattacatctggtact
ggtgctgttcgagcactagatcaaacaaggaatgcagaaacttcagaaggaaacagtaga
tctgagagaagaacaaccctcagaccaccagagacagccacagattatgtgttgtcagtg
cttaatcccagagcctcatcattatccccagctgtcactcgcaggcatagatctcctggt
agaagtacacaaagtgcagtacaaacacctgctcgttctgctcagattctttccaacgat
gacctttatgaggaggaagatgatgttcctccacctccatcccatctacgcagaaggcct
cgcagagagcaccattctgacactcgtattgctggattaatgaacggagatggagagcat
tccttgagccaactgcagcaaagtcgcgctcgtcatctaagccttggtgcattgcctcca
tcgagcgagacttccgaacaaaccgagtcgtcagtggagagagagtcacctgaaagaatt
gctcctgctagacagaggtctgcagcagcccagaattcagacaacatggttcctgtagga
attggcatggctccctctttgacatatccacctcgccattcagttcggcaacctcttcgc
tttgacatctcgctcaattcattggagccggattcagctgatgagcattccagcggcagt
gaggcaggcttgcacactttcatgcgctctaccaatagccctagcatatatgtaaccaca
ccacgcaacaaatacaaccagaaaggccaagccatgattcgctttggtgaacgaggcaat
gcagaacgtcaatttacatggcctagaggagtagcagtctctccacttgatgataatgtt
tacgttgcagacagcagcaatcatcgtgttcaaatctttgataacacaggatgttacatt
agaagctttggtagatatggccaaggtgaaggagagtttgactgtcttgcaggcattact
gtcaatggacttggccaggtcatcatagcagatcgctacaatcaccgcattcaaattttt
gacagaaatggcagcttccagagtgcttttggttcagaaggcataaatgatggccagtta
aactatccatggggaatagcctgtgataacatgggttttatctatgtctgtgataaggaa
aatcaccgtgttcaggtctttcaatctaatggatcatttgtcaggaaatttggacgccta
ggaaatggcactggtcattttgataaccctcattatgtggcagtcagccctgacaacaaa
gtctatgtcagtgatagcagtaaccacagaatccaagtcttcagtatttatggtgacttc
cttttctcttttggcacctcgggcactcttagaggacagatgaagtttcctcgaggtata
gccattgataatcaaggctttgttgttgttgctgatagtggaaataatcgagttcaaatc
tttcgtgccgatggacgatattactccatgtttggaggttggggtagtgagaatggacag
ttcaaagggctggaaggtattgccattcttgctaatggtaatgttgtggtaagtgacagg
gaaaaccacagaattcagatcttttga
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