Pomacea canaliculata (golden apple snail): 112570117
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Entry
112570117 CDS
T05881
Name
(RefSeq) protein NRDE2 homolog
KO
K26109
nuclear exosome regulator NRDE2
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112570117
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112570117
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
Motif
Other DBs
NCBI-GeneID:
112570117
NCBI-ProteinID:
XP_025104141
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Position
LG8:complement(13468730..13478281)
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AA seq
1171 aa
AA seq
DB search
MEKPAKTLFPIASNGPNAASGSNVLFPVASISASDQQNVTTDLDWLENKSYISALAQLPE
SGHESDTQNLQVSQHHHSVKRKSGGDFPEPEEKDFNNKADNRKVKDDASPSYADVEKKKK
KSSHKEKKHKKHKHKKSKSAILEEDLRQETKTEEFWKNHRGKTFLEEIPGLEPESAFRVD
RTKDRALWDYDSIYKDKIARYTRLTSSCLGNPTITISNKKSNTGENEMLNRYYSKENRRI
TRVKGQAVRPSTTKDFKGLEYISVQEKDVSRQLVTEPNRLADSLNILDTATSLYVKGQGK
SSEQSTSESIIFMDETFEKISFYNRRLSEDPKNVKLWTEFVNFQDLVFQNAKFSSQQIPS
RSLRDVFQPPRICIEKKLAILDKALAANPSSLQLKIAKLELEQDIVDSETLMKEWDELLF
SHSGDVHLWRHYLIFQQSRLSAFSVGRTVKLYHRCFKTLRPIMEGSVKVVKMMENLEDEM
IELFVQYCTFLHHCGFTEKAVASYQALIEFNLFRPASLNLQPTTDCISIFESFWDSGVPR
FGEPGALGWAAWVEDSKLTDAAPAKVIQVKTDQEQENILAQNDSVYETWIKLEQLRESAH
WLPWRPDVSRGETEEDCEDLDRLVLYDDVAPTLFRVQKSSSCFTIVAAFLQLLGLGVTID
GCHCKDFDQVKLNALHQIPAASGLDIGVTADPVWKPWPEIETFIEEVLRQAAAYFSGYQR
SVFALYRLQLQREKYGVQDMSALSPEAVKAIRKYGKNLLKELQNRNDLILWNEYIRSEWA
LNKTEDALAMLHTALCMFSDAFALDDHNAMAGMCSLYRTYAEIQLNFLPLDLVKSRIKRA
SSLQMSRQKAMFALFCLADRVKFSPQKQDLLQPPQILRTRKKFQTMAAALMDSNDIVCSA
ASKKYLIQLTCCSALFELCCAGIDNTLQIFDSIIKRSDTVHNNTNSSQTNQAMTELQESL
YVELLLLLKNYMNVEFVSLTTIRSHLQTALSCFPNNTQLLRELIELETRSHIAGRIRRYF
DAAARDTATPYPVLFEVLAEMSRHVKVSGSACREGSGQLEVSDTGTLHRVRAVCERGLQH
RAARHCPLLWRMYLKFEVTFGSHEKAKGIFYRALQTCPWAKVLYLDGAVIFGPNQVQELI
DLITEKEIRLQIPLEEVSLLLNSEPQNLIAM
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaccggcgaaaacactgtttcctatcgccagtaatggaccaaatgctgcgagt
ggcagcaatgttttatttcctgtagcttcaatatctgccagtgaccaacaaaacgtgact
actgacttagactggcttgagaacaaaagctatatttctgctcttgctcaactaccagaa
tcaggacatgaatccgacactcaaaatcttcaggtatcacaacaccatcacagtgttaaa
aggaaatctggtggagactttcctgaacctgaagaaaaagattttaataataaagctgat
aacagaaaagtaaaagatgatgcttcaccatcatatgcagatgttgagaagaaaaagaag
aaaagttctcacaaggaaaaaaaacacaagaaacacaaacacaaaaagtcaaaaagtgcc
attcttgaggaagatttaagacaggaaacaaaaacagaagaattttggaaaaaccacaga
gggaaaacatttctggaggagataccaggtctggaaccagaaagtgcatttcgagtggac
agaactaaggatcgggcgctgtgggactacgattcaatttataaggacaaaattgcacga
tacactcgattaactagttcttgccttggaaacccaaccataactatcagcaataaaaaa
agtaacactggtgaaaatgaaatgctaaataggtactattcaaaagaaaacagaagaatc
accagagttaaagggcaggctgtgagaccaagtacaacaaaagatttcaaaggtttagaa
tatatttcagtccaagagaaagatgtttcaaggcagctcgtcacagaaccaaacagatta
gctgattcattaaatattcttgacacagctactagtctatatgtgaaagggcaaggaaag
tcttccgagcaaagcactagtgaaagtataattttcatggatgagacttttgaaaagatt
tctttttataataggcgtctcagtgaggatcctaaaaatgttaaactctggacggagttt
gtaaacttccaggatcttgtcttccaaaatgcgaaattttcatcccagcagattcctagc
cgcagcctccgtgatgtgttccaacccccaagaatctgcatagaaaaaaaactggctatt
ttagataaagccctggctgccaatccttcatcattgcagctgaaaatcgctaagctggag
ctggagcaggacattgttgattcagaaacattgatgaaggagtgggacgagctgttattt
agccacagtggagatgtccatctgtggcgtcactacctgatatttcagcagtcccgtttg
tcagctttctctgttggtcgtactgtcaaactttaccaccgttgtttcaagactttaaga
ccaattatggaaggcagtgtcaaagtagtgaagatgatggaaaacttagaagatgaaatg
attgaactctttgttcagtactgcacattccttcaccactgtggcttcacagaaaaagca
gtcgcatcataccaagctctaatagagtttaatttgttccgaccagcaagtcttaacctg
caacccaccactgactgcattagcatatttgagagtttctgggattctggagtgcccagg
tttggagagccaggagcattgggatgggctgcttgggtcgaagattcaaagcttactgat
gctgctcctgcgaaagttattcaggtcaagactgatcaggagcaagaaaatatactggct
caaaatgattctgtctatgaaacatggataaagttggaacagctgagagaaagtgcacat
tggttgccatggagacctgatgtttctcgtggagaaactgaagaggattgtgaagatctg
gatcgtctggtgctatatgatgatgtagcaccaactctcttccgtgtacaaaagtcatca
tcttgttttacaattgttgctgcattcctgcagcttttgggtcttggtgtcacaattgat
ggatgtcactgtaaagattttgatcaagtgaagttaaatgcactccatcagatcccagca
gcatctggtctggacataggagtgacagcagatccagtgtggaaaccgtggccagaaatt
gaaacttttattgaagaagttctgaggcaagcagcggcttacttttctggttatcagcgg
agtgtttttgcactttaccggcttcaacttcagagagagaaatatggagttcaggacatg
tcagcattatcaccagaagcagtcaaggccataagaaaatatggaaaaaatctcctgaaa
gaactgcagaaccgtaacgacttgattctgtggaatgaatacattaggagtgagtgggct
ttgaacaagactgaagatgcactagctatgttgcatactgcactttgtatgttctcagat
gcttttgctttggatgaccataatgctatggctgggatgtgctcgctgtaccgcacctat
gcagaaattcagctaaattttttgcctcttgatcttgtgaaatccaggattaagagagca
tcatcattgcagatgtccagacagaaggctatgtttgccttattttgcttggctgacagg
gtcaagttttctcctcagaaacaagatctgctgcagccgccacagattttacgaacaagg
aagaagtttcagactatggcagcagctcttatggacagcaacgatatagtttgcagtgca
gcatcaaagaaatatctcatacagttaacctgttgttccgctttgtttgaactttgttgt
gctggtatagataacaccttgcaaatatttgactctattatcaagcgatctgatactgtt
cacaacaatacaaattcttcccagactaatcaagcaatgactgaattacaagagtcactt
tatgtagagttgctcttgttgttaaagaactacatgaatgtagagtttgtgtcactgacc
accatacgttcacatctgcagacagcactgtcttgttttccaaacaacacacagctgctc
cgggagctcattgaattggagacaagaagtcacatagctgggagaatacgtcgttacttt
gatgctgcagctagagataccgctactccatatcctgtgctctttgaagttctggcagag
atgagtaggcatgtcaaggtttcaggctctgcatgcagagaagggtcaggtcaactagaa
gtctcagacactggcactttgcaccgagtaagagcagtttgcgagcgaggacttcagcat
cgggcagctcgtcactgtcctctgttgtggaggatgtacctcaagtttgaagttaccttt
ggaagtcatgaaaaagcaaaaggtatcttctacagggcacttcagacttgtccttgggca
aaggtcttgtaccttgatggtgctgttatctttgggccaaatcaagtgcaggagctgatt
gacctcataacagaaaaggaaatcaggctacagattccactggaggaagtgtcacttctc
ctaaactctgaaccacaaaacctcatagcgatgtaa
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