Pomacea canaliculata (golden apple snail): 112570328
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Entry
112570328 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcan03036
]
112570328
Chromosome and associated proteins [BR:
pcan03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112570328
microRNA pathway
RISC loading complex
112570328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
dsrm
Motif
Other DBs
NCBI-GeneID:
112570328
NCBI-ProteinID:
XP_025104500
LinkDB
All DBs
Position
LG8:16987983..17007577
Genome browser
AA seq
2249 aa
AA seq
DB search
MTTVSKMVRLGKDSVKRVARHVRYDDIPTDTFTPRTYQVELLESALQGNTIACLGSGSSK
VFLGLMVIKELSYQIRCLPKDGGKRSVYLAVSDQEVDSIWSTLYHHTDIQVGKALSSEAA
LWEQQDWSNFVNANSVLVMSASLFLRGLEKGNLLLTTVNLLVLDDCHVAVGDHEYVKIML
YVLKCGQMAPQLLCLTSSILGTECSDPSSLGSRISELESLLHSKAETSMLVISERFGCRP
KESIIKCEPSVDDTGLTDQLATLLLTSWHFLDECQITLDETTGKRDPLHVPKFAISECLN
ILHVLGPWCAASIAENLLSQVEKIAKHESNQVHKRFLRYVMTQLRLVVRVFEINFTPEYS
VEELLKYTTSKLRALVDVLRKYKPEMDFMIISSEDADGDGISDMSDDDMNIEDDDDEGDD
DDDSFDLDSSDEEDGRNKSPRHIHIAVKRKVETSSDNPFDDDRKLCALVFVDNRYVAFAL
NKMIEEVCSWDENLCFVKSSHITGQGIHRADGKKDLSKASRRQEEVLRKFRMQERNLLVS
TNVLEEGVDIPKCNLVVRFDPPTDYRSYALSKGRARARDAEYVILVDEEVIQDFSQNLNV
FKGIEEVLIGAGRGRQDLEDAQEMLQIDSLDFIALPPFSPSGEPGAPAVSMRNAIALVNR
YCAKLPSDAFTHLTPQCRITTSEFNPEQFVAHLRLPVNSPIKEEVMGSPMPSRQLAKMAV
ALKMYEMLYKSGELDAQLQPVGKEMFVCEEEEEEWEEGEDEPPGQARPGTTKRKQYYIKK
AADAFVNSHPVPDVKCFVYHISMVLSGAITEEQNTRGRKIYAPEETSQSFGLVLSKQIPK
VPSFPVYTRSGEVTVSVNLLQKSTYSQEQLDKLLKFHHFVFTSVLHLEKDPMVFSPQQAD
VGYIIVPLNTSGEGSDLDIEWSFVEHVINSSVHHKRNIFDSKRDTFQFDKAKFEDAVVMP
SYRNIDQPQHFYVAEIRNDLSPLSPFPSPELYKTFAAYYTTKYGLTLTNMDQPLLDVDHT
SARLNLLTPRYMNQKGRALPTSSVETKRARRENLQQKQILVPELCSIHVFPGSLWRKAVC
LPAILYRTNYLLLAEELRKVIAGETGIGKVNLDPSFHFPRLDFGFETNPEKVQVAKQESE
QEESTCSHTEEEAIEQQETENAVRPRQSTQESKLDQKVMRSVESVCAQEEEKADDETSSD
NDSGVTSGDSEIGGVEKGCVYVSGQCSERTDFSASLKESFSQSSSSCSSTVNSDNEASSM
CLASESKHIGDVANGKDGQCESHSCKLCSLGKEGGKVLQHPCCRPISSLCRTHVSQSFHV
HITQNEETSSSNHEPEIFLTYHIHLELDVNFQSDPNALLQNKCTKIDYEGQEDFASSRTY
IKEKENSPKEPVLNHHCCEKTSRPDPDFGRKTISADIPNTEPVAKSEECMDKIKDTQSAD
YQCVEDCDDFLDITGTNQQPPITSTFQVDPEISAFTSADEEIQLTFESGCNLDSIGLDTN
WSKASIASDKEWAPDESLTTFEVSETVSDLSHMGKNGVSESIFSNHNHPHPENISQPLPT
ETKERMYASHSSSRDSDIFENDRQHFSKLDVRSAEEPLFHDKNDLSESEAGTNSSGQNHK
SEHLHKHENTVHNMNKKDCFSNSVQNNHERNEGKKCTDFEIGVWNASGVNSKPISMKKVE
KVPEEITMIPQKEGGAEEKLKTPVSLDADRDLETFVGPSPCLLLQALTMSNANDFFSLER
LETIGDSFLKYAITVYLYCCYPGTHEGKLSYLRSKQVSNYNLYRLGRRKGLAERMVSTKF
EPYENWLPPDFIISEDRRRGPVPKVVIATGNARLSATTPVNFVIEDEESETDTTQRREID
AFHQELKEIDRQQAADQQSDLSCNAKRAMIAYSLQLHHGIPDKSVADCVEALIGCYLTTC
GKQAALTFMSWLGLKVLPHKRCSSQKEHRVPQEVNVYEFDELRCPPSPLIASVPDAPLIL
NRLLEGFSEFEAKINYTFRDRSYLLQAFTHASYHYNFITDCYQRLEFLGDAILDYVITRH
LYEDSQRYSPGILTDLRSALVNNNIFAALAVKWDFHKYFKAISPSLFAVIDKFVVWQKER
EDEFDELNEEQEETDEDEENEEDKDEEVELEIPKALGDIFESVAGAIYLDSGMSLDTVWR
VYYNMMKPYIDKYLKDIPKSPVRELLEMEPETAKFEKPERTLDGKIRVTVNVVGKGVFSG
VGRNYRIAKSAAAKKALRFIRTMQQEGMM
NT seq
6750 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagtatccaagatggtgagacttggcaaagattcagtgaaaagagttgcaagg
catgtcagatatgatgatattccaactgataccttcacccctcgcacctaccaggtggag
cttctggaatcagctttgcaaggcaacaccattgcctgccttggaagtggttccagtaaa
gtctttctgggacttatggtgataaaagagctatcttaccagatacgctgcttaccaaaa
gatgggggcaaaaggagtgtttatctggctgtgtcagaccaagaagtggattccatttgg
agtacactatatcatcacactgatattcaagtgggaaaggctttatcgtcagaagcagct
ttgtgggaacagcaggactggtcaaattttgttaatgctaacagtgtgcttgtcatgtca
gcttccctcttcttgcgtggccttgagaaaggtaaccttttgctcaccaccgtgaacctt
ctagtgctggatgattgtcatgtagctgtgggagaccatgagtatgtcaagatcatgttg
tatgtgctgaagtgtggacaaatggctccccaacttctgtgcttgacctcttccattctt
ggaacggaatgcagcgatccctccagcctggggtccagaataagtgagcttgagtccctg
cttcattccaaggctgaaacctccatgcttgtaatatctgaacgctttgggtgtcgccct
aaggagagcatcatcaagtgtgagccaagtgtcgatgacactggacttaccgatcagttg
gccacgttgctgctcacatcctggcactttcttgatgagtgtcaaataacattagatgaa
acaacaggaaagagagatccattgcacgtacccaaatttgcaatttcagaatgccttaat
attcttcacgtcttaggtccatggtgtgcagcgtctatcgctgaaaatttactcagtcaa
gtggaaaagattgctaaacatgaatcaaaccaagtccataagcggtttttacgctatgtc
atgacacagctacggcttgtcgtcagagtatttgaaatcaactttactccagagtacagt
gttgaagaattgcttaagtacaccacttcaaaattgagagcgttggttgatgtcctgaga
aaatacaagccagaaatggacttcatgattataagtagtgaagatgctgatggtgatggg
atttcagacatgtctgatgatgatatgaatatagaagacgacgatgatgaaggtgatgat
gatgatgattcatttgatcttgacagttctgatgaagaagatggcagaaataaatccccc
aggcatatccacattgcagtcaaaagaaaggtagagactagcagtgataatccctttgat
gatgataggaaactgtgtgcattagtatttgtagacaatcgttatgtggcatttgcactg
aacaaaatgatagaggaagtgtgctcctgggatgagaatctctgttttgttaaaagcagt
cacattacgggtcaaggcattcacagggcagatggaaagaaagatttaagcaaggcatcc
cgtcggcaggaagaagtgctgagaaaattccgtatgcaggaacgaaacttgcttgtttct
accaatgttctggaagaaggagttgatataccaaagtgcaacttagttgttcggtttgat
ccaccaacagattaccgctcatatgcactttccaagggacgtgcccgtgctcgtgatgct
gaatatgtgatacttgttgatgaagaagttattcaagatttttcacagaatttgaatgtt
ttcaagggtattgaagaggtgctgatcggagctggaagaggaagacaagacctggaggat
gctcaggagatgctacagattgacagtctagatttcatagctctgccacctttcagtcct
tctggagagccaggggctcctgctgtttccatgagaaatgccattgcactggtaaaccgg
tactgtgccaaactgccaagtgatgccttcactcacctgacacctcagtgtcgtattact
acctcagaatttaacccagaacagtttgtggctcacctccgcctgcctgtcaactcacct
atcaaagaagaagttatgggtagccctatgcccagtcgtcagctggcaaaaatggctgtt
gctctcaagatgtatgagatgctgtataaatctggagaactagatgcccagctacagcca
gtagggaaggagatgtttgtgtgtgaagaggaggaagaggagtgggaggagggagaagat
gaacccccagggcaggcccgaccaggcaccacaaagcgcaagcagtactacataaagaag
gcagcagacgcatttgtaaacagccatccagtaccagatgtcaagtgctttgtttatcat
atttctatggtgctttctggggccatcactgaagaacaaaacacgagagggcgcaaaatc
tatgcccctgaagaaacttcgcagtcatttggacttgtattgtccaagcagattcctaag
gtgcccagttttccagtttacactagatcaggggaagtgactgtgtcggtaaatctgttg
caaaagagcacctactctcaggagcagctagacaagcttctgaagttccatcactttgtc
ttcactagtgttttgcatttggagaaggatcctatggttttttcccctcaacaagctgat
gttggctatatcattgtccctcttaataccagtggagaaggctcggacctggacattgaa
tggtcttttgtggagcatgtgataaactccagtgtgcatcacaagcgcaacatctttgac
agcaagcgagatacttttcagtttgacaaagcaaagttcgaagatgctgttgtcatgcct
tcttatcgtaacattgatcaacctcagcatttctatgtggcagaaatccgcaatgacctt
agccccctgagcccctttccctcccctgaattatataaaacttttgcagcctactacact
acaaaatatggtctcacgctcaccaacatggaccagcctcttctagatgtagaccacact
tcagcacgactgaacctcttgacacctcggtacatgaatcagaaggggcgagctctgcca
acgagcagtgtggagactaagcgagcacgcagagagaatcttcagcagaagcagattttg
gtaccagagctatgttccattcatgtcttcccaggatctctttggcgaaaagctgtttgc
ttgccagctattctgtaccgcaccaattacttacttttggcagaggaactacgtaaagtt
attgcaggtgaaactggaataggaaaagtgaatttggatcccagtttccatttccctcgg
ctagattttggattcgaaacaaatcctgagaaagtgcaagtagcaaagcaagaaagtgaa
caagaagaatctacttgctcacacacggaagaggaagccattgaacaacaagagactgag
aatgctgtcagacctcggcagtcaactcaagagagcaaactggatcaaaaagtcatgaga
agtgtagagtctgtttgtgctcaagaagaagaaaaagcagatgacgagacatcttcagac
aatgattctggtgttacatctggtgactctgagatagggggtgtggagaagggatgtgtt
tatgtttcaggtcagtgttctgaaagaacagacttttctgcatctctcaaggaatcattc
agccagtcatcgtcatcttgcagctcaacagtaaattcagataatgaggctagcagcatg
tgtttagcttcggaaagtaagcatattggtgatgtggcgaatgggaaagatggccagtgt
gaatctcattcttgcaaactgtgcagtctaggtaaagaaggtgggaaggtgctgcagcat
ccctgctgtcgtcccatctcatctttatgcagaacccatgtatctcaatcatttcatgtg
catattactcagaatgaagaaacttctagttcaaaccatgagccagaaatatttctgacg
tatcacattcatttagaattggatgtgaatttccagagcgatccaaatgcactgttgcag
aataaatgcaccaaaatagattatgaaggccaggaggactttgcttccagtcgaacatat
atcaaagagaaagaaaattctcctaaagaaccagtacttaatcatcattgttgtgaaaaa
acaagcagaccagacccagattttggaaggaaaactatctctgcagatataccaaacacg
gaacctgttgctaagagtgaagaatgcatggacaaaataaaagacacccaatctgcagac
tatcagtgtgtggaagattgtgatgattttctagatattacagggaccaatcaacaaccc
ccaatcacatcaacattccaagttgaccccgagatctcagctttcacgagtgcagacgaa
gaaattcagcttacctttgagtctggatgtaatcttgattccattgggctagacacaaac
tggtccaaggccagcatcgcctctgacaaagaatgggctcctgatgaaagcctcactacc
tttgaagtcagtgaaactgtgtctgatctcagtcacatgggcaaaaatggtgtcagtgag
tctattttctccaaccataaccatcctcaccctgagaatatttcacaaccactgcccaca
gagacaaaagaaagaatgtatgcatcacattcatcatcaagggattctgacatctttgaa
aatgacaggcagcatttttctaaattggatgtgagatctgctgaagaacctttgttccat
gacaagaatgatctttcagaaagtgaagcagggacaaactcatcaggtcagaatcacaag
tccgaacacctacacaagcatgaaaatacagtgcataacatgaataaaaaggactgtttt
agcaactctgtgcagaataatcatgaaagaaatgaaggaaaaaaatgcacagactttgag
attggtgtttggaatgcatcaggagtcaacagcaagcctattagcatgaaaaaagtagaa
aaagtgccagaagagataaccatgattcctcagaaagaaggtggtgctgaagaaaaattg
aaaactcctgttagcttagatgctgatagagatctggaaacatttgtgggccccagtcct
tgcctgcttctgcaggctctgacaatgtccaacgcaaatgacttcttcagtttggaaagg
ctggagaccatcggagactctttccttaagtatgccataacagtgtacctgtactgctgc
tatccaggtacacatgagggcaaactcagctatctgcgcagcaaacaggtaagcaattac
aacctgtaccgccttggaaggcgcaagggactggctgagcggatggtgtcaaccaagttt
gaaccatacgaaaattggctgccacctgattttatcatcagtgaagatcgcaggcgaggt
cctgttcctaaggttgtaatcgccacaggcaatgccagactgtctgcaacaactccagtc
aactttgtgattgaggacgaagagtcagaaacagacaccacccagaggcgagagatagat
gcctttcaccaagagcttaaagagattgaccgccagcaggctgccgaccaacagagtgac
ttgagctgcaatgccaagcgtgccatgattgcttacagtctgcagttgcaccacggcatc
ccagacaaaagtgtagctgactgtgttgaggcactcattgggtgctacctgacaacatgt
ggcaagcaagcagctcttaccttcatgtcctggctaggcctgaaggttctgccacacaaa
cgctgttcaagtcagaaggaacacagagtgccccaggaggtgaatgtgtacgagtttgat
gagctgcgttgtccaccatcccctctcattgccagcgtgcctgatgcaccactcatttta
aatcgtctgctggaaggattttcagagtttgaggctaagattaactacacattccgggat
cgctcttatttgctgcaggcatttactcatgcctcttatcactataatttcatcactgac
tgttaccagagactggagtttctaggagatgccattctggactatgtgattaccagacat
ctttatgaagattctcagcggtactcccctggcattctcacagaccttcgttcagccctt
gtcaacaacaacatttttgcagccttagctgtcaaatgggatttccacaaatatttcaaa
gccatctccccatctttatttgctgtcattgataagttcgttgtgtggcagaaagaaaga
gaggacgagttcgatgaactaaatgaggagcaagaagaaactgacgaagatgaagagaat
gaagaagacaaggatgaggaagtggagctggagatccctaaagctcttggcgacatattt
gaatcggtagcaggtgctatctatcttgatagtggcatgtcccttgacacagtctggcgt
gtctactacaacatgatgaaaccttacattgataaatatctgaaagacattcccaagtct
cctgtcagagaactgctagaaatggagccagagacagcgaagtttgagaaaccagagcgt
actttggatggaaaaattcgtgtgactgtaaatgtggtgggtaaaggcgtctttagtggt
gttggtcgcaactaccgcattgcaaagagtgcagctgccaagaaagcccttcgcttcatc
cgcaccatgcagcaggagggaatgatgtag
DBGET
integrated database retrieval system
