Pomacea canaliculata (golden apple snail): 112573295
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Entry
112573295 CDS
T05881
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03013
Nucleocytoplasmic transport
pcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112573295
09122 Translation
03013 Nucleocytoplasmic transport
112573295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112573295
03041 Spliceosome [BR:
pcan03041
]
112573295
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112573295
Spliceosome [BR:
pcan03041
]
Complex C
Other components
EJC/TREX
112573295
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112573295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
112573295
NCBI-ProteinID:
XP_025109305
LinkDB
All DBs
Position
LG10:16889910..16901093
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AA seq
648 aa
AA seq
DB search
MAAPTEFDFSVACASFQNVVQKAVDNNDPDQCFTFVESYCGNEQEKKAALDQAIRDVLRH
MIVLDQGCDRYKQVIGLVVQAVLKEMCSASTPIIMLSDVFDMLVLADCEVMFNFVEDGVS
TWKAEPFFDAGKNYLLRMCNDLIRRLSKSQNTVFCGRIQLFLSRLFPLSEKSALNLMSQF
NVENITEYDKKPSKIPVKQEKMEVEDGEDTAANSIVIDYNLYCKFWSLQEFFHKPTQCFD
KAHWRIFLMHSDEVLGAFSSYKLDDLVSQRKKLARRDDQSHNFFAKYLTSEKLLDLQLSD
SNFRRYVLVQFLILFQYLTSPVRFKSATQMLSEEQTQWVKTSEERVYQLICETPPSGDKF
ADTVKHVLQREENWNAWKNDSCPSFEREKAKEATKPKSRPKKRRIGDDLQVSGGKIIKMG
SEELTRLWNLNPDNMDACRSEKREFMPTLEEYFANAIEQNDPEAMLEEQYKDINNQNFQW
KGLRLLARRSPHFFLHSNQPAMPLPSYLELMISKIAKEMPAHGTEEMKTQVGEEEEDDMK
EPQEDEENGEEHEQNDKEEVNNLITRDQMVALGRQLGDNWRKLATELGFGGEDIADFEEL
PDEETKLPGTKMIFLWQDMDKENRVQALKDALKEIGLSSITESVFGSS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccacggaattcgacttcagcgtagcttgcgcatcatttcaaaatgttgtt
cagaaagccgttgacaacaatgatccagatcagtgtttcacatttgttgaatcctattgt
ggaaatgagcaagaaaaaaaggcagcacttgatcaagctataagggatgtattgcggcat
atgattgtccttgaccaaggctgcgacaggtacaagcaagttataggactagtggtgcag
gctgtgttaaaagaaatgtgctcagcatccaccccaatcatcatgctttctgatgtgttt
gacatgcttgtgctagctgactgcgaagtgatgtttaattttgtggaagatggagtttca
acttggaaagctgagcccttctttgatgcaggaaaaaactatttgctcagaatgtgcaat
gatttgattcggcgcttatcaaaatcccagaatactgtattttgtggtcgaattcagctc
tttttatcaaggttgttcccactgtcagagaaatcagccttaaatctgatgagtcagttc
aacgtggaaaatatcacagagtatgacaagaaaccttcaaaaatccccgtaaaacaggag
aagatggaagtagaagatggagaagatacagcagcaaactccattgtgatagattacaac
ctctactgcaaattttggtctcttcaggagtttttccacaaacctactcaatgctttgac
aaggctcactggcgaatatttcttatgcactcagatgaagtgcttggtgccttttcaagc
tacaagctagatgatctggtatcacagcgaaagaaactggcaaggcgagatgaccaatca
cataatttctttgctaaatatcttaccagtgaaaagcttctggacctccagttgtcagac
agtaatttccgtcgctatgtgctggtgcagtttctgattctcttccaatatctcacgtct
cctgtcaggttcaagagtgcaacacaaatgcttagtgaagaacaaacacagtgggtgaag
acatcagaggagcgagtgtatcagcttatttgtgagacgccgcctagtggtgacaagttt
gctgacacggtcaaacacgtccttcaaagagaagagaactggaatgcctggaagaatgat
agttgtccttcctttgagagagaaaaagcaaaagaagcaacaaaaccaaaaagtcggccc
aagaagcgtcgtattggtgatgatctgcaggtcagtggtggtaagatcatcaagatgggt
agtgaggagctcactcgtctctggaacctcaacccagacaacatggatgcctgtcgctct
gaaaaacgggagtttatgcctacattggaagaatattttgcaaatgcgatcgagcagaat
gacccagaagccatgctggaggagcagtacaaggacattaataaccagaacttccaatgg
aaaggcttaaggctgcttgctcgtcgcagcccccacttcttcctccactccaaccagcct
gccatgcccctacccagctatctggaactcatgatttctaaaattgccaaagagatgcct
gctcatgggactgaggagatgaagacacaagtgggagaggaggaagaagatgacatgaag
gaaccccaggaggatgaggagaatggagaagagcatgagcaaaatgacaaagaagaggtg
aacaatcttatcacgcgagatcaaatggtggcattaggacgtcagctcggtgataactgg
agaaaactggcaacagagctaggctttggtggtgaagacattgcagactttgaggaactg
cctgatgaagaaacaaaactgcctggcactaaaatgatctttttgtggcaggatatggat
aaagaaaacagagtgcaagcactaaaagacgcattgaaagaaattggactatcaagcatt
acagagtctgtgttcgggtcatcttga
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integrated database retrieval system
