Pomacea canaliculata (golden apple snail): 112576936
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Entry
112576936 CDS
T05881
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcan03041
]
112576936
03016 Transfer RNA biogenesis [BR:
pcan03016
]
112576936
Enzymes [BR:
pcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112576936
Spliceosome [BR:
pcan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
112576936
Transfer RNA biogenesis [BR:
pcan03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
112576936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
112576936
NCBI-ProteinID:
XP_025115602
LinkDB
All DBs
Position
LG12:2996085..3171030
Genome browser
AA seq
731 aa
AA seq
DB search
MTAFEEMGVMPEIAQAVEEMDWNLPTDVQAEAIPMILGGGDVLMAAETGSGKTGAFCLPI
LQIVYETLLDQREGKGGGGGKRTGQTGSHKWKMNAHDRGDALAIDPEGTLCQARDSQNWH
GTRSNKAVVGGGKWYFEGTVTDEGLCRVGWSTDQARLDLGTDKFGFGFGGTGKKSWNKQF
DTYGEPFGMNDTIGCYLDLDKGEIFWFKNGIDLGKAYDIPANLKSEPFYAAVVLKNAEMH
FNFGESPFKFPPKNGFVGLASASGKNVIDSKVVAEGPVNAKPAPNAPQAIIIEPSRELAE
QTCVQLQKFKKHLKNPTVRDLLIIGGVAAREQVDALEKGVDIVVGTPGRLEDLISTGKLA
LHQVRFFVLDECDGLLSQGYGDLINRLHQQIPKVTNDGKRLQMIVCSATLHSFDVKKMAE
RLMYFPTWIDLKGQDSVPETVHHCVCMVDPKVDTQWKTLRQHIVTDGVHQKDKIGGDTPE
TYSEAVKILKGEYVIRAIEKHNMDVALIFCRTKLDCDNLEKYLNERGKGKYSCVCLHSDR
APNERKANLQKFKDRKVRFMICTDVAARGIDVNGLPFVINVTLPDEKQNYIHRIGRVGRA
ERMGLAISLVAANKEKVWYHSNCSSKGKGCYNTRLTDEGGCCIWYDEPTLLNDIEEHLDI
TIDRVGNDFDVPVNEFDGKVTYGQKRKGGGSLYKGHVEFLAPTVSELAQLEKAAQTSFID
LKYKKKFARRQ
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgactgctttcgaagaaatgggagtgatgcctgaaattgcacaggctgtggaggagatg
gattggaacttaccaactgatgtgcaagctgaagctatccctatgattcttggtggtggg
gatgtcctaatggcagcagaaacaggcagtggaaaaacaggtgctttctgtctgcccatt
ctgcaaattgtgtatgagactcttcttgatcagcgtgaaggcaaaggaggaggaggagga
aagcgaactggacaaactggcagtcacaaatggaagatgaatgcacatgaccgtggtgat
gcccttgcaattgatccagaggggacactctgtcaggctcgtgattcccaaaattggcat
ggcactcgatccaacaaggctgtagtaggaggaggtaaatggtacttcgaaggaacagtg
acagatgaaggtctctgccgtgtgggctggtcgactgaccaggcacgacttgatcttggt
acagacaaatttggctttggttttggaggaactggcaaaaaatcttggaacaaacagttt
gacacctatggtgagccctttggaatgaatgacactattggatgttatttagatctggac
aaaggagaaatcttctggttcaaaaatggaatagaccttggcaaagcctatgacattcct
gccaatctgaaatctgagccattctatgctgctgttgtgctaaagaatgccgaaatgcat
tttaattttggagaaagtcctttcaagtttcctccaaaaaatggctttgttggtctggct
agtgcatcaggcaagaatgtcattgactccaaggtagtagcggaaggaccagtaaatgcc
aaacctgcaccaaatgcaccccaggcaatcattattgagccatccagagaactggcggaa
cagacgtgtgtgcagctgcaaaaatttaagaagcacctgaaaaacccgacggtcagagac
ttgctaattattggaggtgtagcagcacgagagcaagtagatgctctagaaaagggggtg
gacattgtggtgggcacgcccggtcgtctagaagaccttatctccacgggcaagctggcg
ctacatcaagtgcggttctttgtgctggacgaatgtgatggattgctgtctcaaggctac
ggcgacctgatcaaccgacttcatcagcagatccccaaggtcaccaacgacggaaagcgg
cttcagatgattgtttgctcggccacgcttcattccttcgacgtcaagaaaatggcggag
cggctgatgtattttcctacctggattgacctgaaaggtcaggactcagtaccggagact
gtacatcattgcgtttgcatggtcgatcccaaggtggacactcagtggaagactctgcga
caacacattgtcaccgatggcgttcatcagaaggacaaaatcggaggcgatacaccagaa
acgtattctgaggctgtgaaaattctcaagggagaatacgtcatccgcgccattgagaag
cacaacatggatgtggccctcatcttctgccgcaccaagctggactgtgacaacctggag
aaatacctcaatgagcgaggcaaagggaagtactcctgcgtttgcttacatagcgatcgt
gctcccaatgagcggaaggcaaacctacagaaattcaaggatcgcaaagttcgctttatg
atctgcaccgacgtggctgcccgtggaatcgacgtcaacggccttcccttcgtgattaac
gtgacccttcccgacgagaaacagaactacatccatcgtatcggtcgtgtggggcgagcc
gagaggatgggtctagcaataagtcttgtagctgcgaacaaagaaaaggtgtggtatcac
tccaactgcagcagcaaaggtaaaggctgctacaacacgcgtctgactgacgaagggggc
tgctgcatctggtacgacgagcccacgcttcttaacgacatcgaagagcatctggatatc
accattgaccgcgtcggcaacgactttgatgtacctgtcaacgaatttgatggcaaagtg
acgtatggtcagaagcgtaaaggaggaggctcattgtacaagggacacgtggagtttctg
gcaccaacagtgtccgagctggcacagctggagaaagcggcccaaacttcgttcatcgac
ctgaagtacaagaagaagttcgcgcgtcgccagtaa
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