Phalacrocorax carbo (great cormorant): 104039695 Help Entry 104039695         CDS       T08596                                  Symbol RC3H2 Name (RefSeq) roquin-2   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism pcao  Phalacrocorax carbo (great cormorant) Brite KEGG Orthology (KO) [BR:pcao00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:pcao03000]     104039695 (RC3H2)    04121 Ubiquitin system [BR:pcao04121]     104039695 (RC3H2) Transcription factors [BR:pcao03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     104039695 (RC3H2) Ubiquitin system [BR:pcao04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     104039695 (RC3H2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4_3 Prok-RING_4 zf-C3HC4 zf_CCCH_4 zf-C3HC4_4 zf-C3HC4_2 Xin zf-RING_10 Motif Other DBs NCBI-GeneID:  104039695 NCBI-ProteinID:  XP_009509455 LinkDB All DBs Position Unknown AA seq 1195 aa AA seqDB search MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI GSPEATGKMVPSTNGIANLESGVPQLIPRCADTSLRALENTKKGGKAGANGQNVSGSPTE SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDST SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD EGSRLTLNLLSKEIDLRNGEVKKGTDYTEDCADTKPDRDIELELSALDTDEPDGQGEQIE EILDIQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDFVILEEQKTILPVT SCFSQPITTSVSDASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS NT seq 3588 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc ttgaatcagagtgcactgagccgtccaatgcaaaggaagcttgtaacgctggtgaattgt cagctggtggaggaagagggtcgggttagagctatgagggcagctcgatcactgggagag agaactgttacagaactgatcctgcagcaccaaaatcctcagcagctttctgccaatctt tgggctgctgtcagggcacgaggatgccagtttctaggtccagctatgcaagaggaggca ctgaaacttgtattactggcactggaagatggctctgcactctcgagaaaagttctggta ctttttgttgtacaaaggctagaaccaagatttcctcaggcctctaaaacaagcattggt catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat tcttctctgatgcaacttaaagaagagtttcggagttatgaggctttgcggagagaacat gatgcccagattgttcacattgccatggaagcaggacttcgaatatcgccagaacaatgg tcttcccttctttatggtgacttggcacataaatcacacatgcaatccattattgacaag ctccaatctccagaatcttttgcaaagagtgtacaagaattgacaattgtcttgcagcgc acgggggatcctgcaaacttaaacaggctgaggcctcatttagagctgctggcaaacata gatccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggtcgct gtaaagactgtggtacatgggctggtggatttcattcagaattacagtagaaaaggccat gaaactccacagccacaaccaaatagtaaatataaaacaagtatgtgccgagaccttcga cagcaagggggatgtccaagaggaacaaactgtacgtttgctcattctcaggaagagctc gaaaaatatcgcttgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttcta aataaagttggcgtaaatagcaccgtctcaaccacaacaggaaacgtaatttctgtcata ggaagccctgaagcaacagggaagatggtgccaagtactaacggaatagctaatctagaa agcggtgttccccagttgatccctcgctgtgcagacacctccttgagagctttggagaac accaagaagggagggaaggctggagccaacggccagaatgtttctggatcccctacagaa tcactacctgaaaataaaattggttctccacccaaaactcctgtaagccaggcagcagct acctccgctggtcctcctaacattggaacagaagttaattctgtgcctccaaaatccagc ccgtttgttcccagagtacccgtctaccctccacattctgataacgttcaatatttccaa gatcccaggactcagctgtcatatgaagttccacagtacccacagactggatattatcca ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat aacgttccagaatcttccctcccacctgcttccgtgccatatgccgatcattacagtaca tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat gtgatgcactcatctgtctatcagacatcattacgtgagagatacaactctttggatggg tattactctgtggcttgtcaacctccaaatgaacagaggactgtgcctttaccaagggag ccttgtggtcatttgaagactgggtatgatgagcaattaagacggaagccggagcaatgg gcacagtaccacacacagaagactcctctggtatcgtcaacccttcctatggcaacacca tctccaacgccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt gccaattcaaatgccgtgttaatggatttggacagcggggatgttaaaaggagagtgcat ttatttgaaactcagagaagggcaaaggaagaagatcctataatcccatttagtgatgga ccgatcatctccaagtggggtgcaatctccaggtcatcccgcacgggttatcacacgaca gatcctattcaggccactgcttcccaaggaagtgctactaagcccatcagtgtatcagat tatgtcccttatgtcaatgctgttgactcaagatggagtgcctatggctcagattctact tcatcagcacgttatgcggaacgggataggttcatagttacagatttgtctggtcacaga aagcattccagcactggagatctactgagtattgaattacagcaggccaaaagtaactca ttattacttcagagagaggcgaatgcactagccatgcagcagaagtggaattctctagat gaaggcagtcgtcttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag gtaaagaaagggaccgattatactgaagattgtgcagacacaaagcctgaccgagacatt gaattggagctgtcagcccttgatactgatgaacctgatgggcaaggtgaacaaatagaa gagattctggatatacagctaggtattagttcgcaagatgatcagctgctcaatggaaca actgtagagaacgggcatccgctaaagcagcaccagaaagaatctatggaacagaagaga caaagtttaggtgaagactttgtgattctggaggagcagaaaacaatcctgcccgtaact tcttgcttcagtcagccgatcacaacatctgttagcgatgcaagctgcctgcccatcagc acatcagtcagtgttggcagcctcattttgaaaactgctcacattatgtctgaggataaa aatgactttttaaagcctgttgcaaatggcaggatggttaacagctga

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