Phalacrocorax carbo (great cormorant): 104042943
Help
Entry
104042943 CDS
T08596
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104042943 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcao03000
]
104042943 (CNOT4)
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104042943 (CNOT4)
04121 Ubiquitin system [BR:
pcao04121
]
104042943 (CNOT4)
Enzymes [BR:
pcao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104042943 (CNOT4)
Transcription factors [BR:
pcao03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104042943 (CNOT4)
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104042943 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104042943 (CNOT4)
Ubiquitin system [BR:
pcao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104042943 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Torus
Nup35_RRM_2
DZR_2
zf-CCCH_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
104042943
NCBI-ProteinID:
XP_009500768
UniProt:
A0A093T5C5
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGTVDKNKNKVTALQRPNSNNKDAWPSLQSSSKSANGLTMEHRKT
PPILENGTDPEHMTPDGADSDFGPIDKPSDSLSIGNGDSSQQITNSDTPSPPPGLTKPNP
VIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSNDWPTAPEPQ
SLFTSETIPVSSSTDWQAAFGFGSSKQQEDDLGFDPFDITRKALADLIEKELSVQDQPSL
SPASLQNPTPHTTTAKGPGSGFLHPAAPTNANSLSSTFPVMPQRFPQFQQHRAVYNSFSF
PGQAARYPWMAFPRNSIMHLNHTANPTSNSNFLDLNLPPQHSTGLGGIPISDNSSSVESL
NMKEWQDGLRALLPNININFGGLPNASSPSNANHSVPTSNTATTDSLNWDSPGSWMDPAI
ITGIPASTGNSLDTLQDDNPPHWLKSLQALTEVDGPSAAPSQTHHSNPFGTQIPLHRASW
NPYSPPSNPTSFHSPPPGFQTAFRPPSKTPTDLLQSSALDRH
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcagccctgatgctaaggaagaccctgtggaatgccccctttgcatggagcct
ctggaaattgatgacatcaacttcttcccttgcacctgtggctaccaaatctgtcgtttc
tgttggcatcgtatccgcactgatgagaatggactttgtcctgcttgcagaaagccatat
ccagaagatccagcagtgtacaaaccactctcccaggaagagctgcaaaggataaaaaat
gaaaagaaacaaaaacaaaatgagaggaaacagaagatatcagagaaccgcaaacacttg
gccagtgtacgggttgtacagaagaaccttgtcttcgtggtagggctgtctcagcgccta
gcagatccagaggttttgaaacgaccagaatattttgggaagtttggtaaaatacataaa
gttgtcattaataacagcacatcatacgcaggctcacagggtccaagtgccagtgcatat
gtaacctacatccggtcagaagatgctctcagagccatacagtgtgtcaataatgtggtg
gtagacggcagaacacttaaggcatcattaggtacaacaaaatattgcagttattttcta
aaaaatatgcagtgtccaaaaccagactgcatgtatctacatgagctgggagatgaagca
gccagtttcacaaaagaagaaatgcaggcgggtaagcaccaggaatatgaacagaaacta
ctgcaagaattatataaactaaaccccaactttctccagttatctacgggtacagttgac
aagaacaagaacaaagtgacagcactgcagagacccaacagtaataacaaagatgcctgg
ccatcattacagagttcaagtaaatcagccaacggtttaacaatggaacacaggaaaacg
cctcctatattagaaaatggcacagacccagaacacatgactccagatggtgcagactca
gatttcggccctatcgacaaaccttcagattcgctcagtataggaaatggtgacagctcc
cagcagataacaaacagtgacacaccttcaccaccgcctggtttaacaaaacccaatcca
gttatacccatcagttcatctaatcacagtgcacggtctccttttgaaggggctgtaaca
gaatcacagtcactcttctctgacaactttcggcaccctaaccccatccctagtgggctt
cctccattccccagctctccacagacttcaaatgactggcccacagcaccagaaccacag
agcctcttcacatcagaaactataccagtatcctcctccacagactggcaagcggctttt
gggtttggttcctccaaacagcaagaggacgacttagggtttgacccctttgatatcacc
cgcaaagccttagcagacctgattgagaaggaactgtcagtccaagaccaaccttccctc
tcgcctgcatctcttcagaaccctaccccacacactacaactgccaaagggccaggctct
ggattcctgcatcctgctgcacccacaaatgccaactctctcagtagcacctttccagtc
atgccacagaggttcccacagtttcaacaacatcgagcagtttacaactccttcagtttt
ccaggccaagcagctcgctatccttggatggccttcccacgcaatagcatcatgcacttg
aaccacacagcaaatcccacctcaaatagtaatttcttggacttgaatctcccaccacaa
cacagcacaggtctgggagggatccctatatcagacaacagcagttctgtagagagttta
aatatgaaggaatggcaggacgggctaagggcacttctaccgaacattaacatcaacttt
ggtggactgcccaatgcttcttccccctccaacgccaaccacagtgtaccaacgtccaac
actgccaccaccgacagcctgaattgggacagccctggcagctggatggaccccgcaatc
atcacaggtatcccagcctccacaggaaacagtttagacacccttcaagatgacaatcct
ccacattggctaaaatctcttcaggccctcacagaggtggacggccccagtgcagcgcca
tcacagacgcaccacagtaaccccttcggcacacagatccctctgcacagagccagttgg
aatccctactctcctccttcaaaccccaccagcttccattccccacccccaggctttcag
acagccttcagaccccccagtaaaacccccacagatctactacagagctcagcgctggat
cgtcattag
DBGET
integrated database retrieval system
