Phalacrocorax carbo (great cormorant): 104042999
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Entry
104042999 CDS
T08596
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03022
Basal transcription factors
pcao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104042999
09124 Replication and repair
03420 Nucleotide excision repair
104042999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcao03021
]
104042999
03400 DNA repair and recombination proteins [BR:
pcao03400
]
104042999
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104042999
DNA repair and recombination proteins [BR:
pcao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104042999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
VWA
VWA_3
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
104042999
NCBI-ProteinID:
XP_009500832
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATXXXXXXXRRGKGIILYEHHGQVRLGMM
RHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQLGLIVTKSKRAEKMT
ELSGNSKKHITALKKAVDMNCSGEPSLYNSLNLAMQTLKHMPGHTSREVLIVFSSLTTCD
PANIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHIILDESHYKELLMHHVSP
PPASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSEPGLTLGGYFCPQCRAKY
CELPVECKIC
NT seq
931 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaacccgaacggaccaagcgctgggaaggaggctacgaaaggacatgggaa
attcttaaagaagatgaatccggatcgctgaaagcgaccannnnnnnnnnnnnnnnnnnn
cgaagaggaaaaggtattatactctatgaacaccatggacaagttcgacttggaatgatg
cgtcacctttacgtggttgttgatgggtcaagaactatggaggaccaagatttaaaaccg
aacagacttacttgcactttgaagttattggaatattttgttgaagagtactttgaccaa
aatcctattagtcagcttggcttaattgtaaccaagagtaagagagctgaaaaaatgaca
gaactttcaggtaactcaaaaaagcacataactgctctgaagaaagcagtggatatgaac
tgcagtggagagccatctctatacaattctctgaatttggccatgcagactttaaagcac
atgccaggacatacaagcagagaggttttgatagtcttcagcagtctgacgacatgtgat
ccagccaacatctatgatctaattaagtgtttaaaagcagttaagatcagagtatctgtc
attggcctaagtgctgaagttcgagtttgtacagtacttgcccgagaaactggtggaaca
taccacattattttagatgaaagtcattataaggaactcctgatgcatcatgttagtcct
ccacctgccagttcaagttctgagtgttcccttattcgaatgggttttcctcagcatacg
attgcttctttatctgatcaagatgcaaagccatcctttagcatggcgcaattggaaaac
aacagcgagccgggtctgacactgggtggatatttctgtccccagtgcagagccaaatac
tgtgaacttcctgtggaatgcaaaatctgtg
DBGET
integrated database retrieval system
