Phalacrocorax carbo (great cormorant): 104043062
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Entry
104043062 CDS
T08596
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104043062 (DHX57)
Enzymes [BR:
pcao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104043062 (DHX57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
RWD
DEAD
HA2_C
HA2_N
zf-CCCH_4
AAA_22
nSTAND3
Torus
AAA_19
zf_CCCH_4
T2SSE
zf-CCCH_2
UBA
ResIII
Viral_helicase1
Ribosomal_60s
NB-ARC
AAA_14
FtsK_SpoIIIE
Gsf2
AAA_16
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
104043062
NCBI-ProteinID:
XP_009500903
LinkDB
All DBs
Position
Unknown
AA seq
1359 aa
AA seq
DB search
GKPNRGGGRGRGGSGRGRGGGSSGHSNKSQLGRNRKCSTKIWDDGDDFCLFEEPRLESRS
NASARRGGQKQQRPEARMPLQTIHMTSENQRRVKELLQELQGQELAPESEVAGSGEDDDE
PDYLDDEQCWSTDLEVSDIIPRSSAEPAEDRIVESEVSSFAVHKLSRYGFDSERCRRILR
SCNGNIGASLEYLLLQCFTERYGEKVQVFPTAAEASQEECLEQRQEEAFALRSIYGEKFV
ERIQNRVWTFSLELEYLENRLSKSKQKGSCSRDAAKQTSKEICKFYLQRGCRFGSKCRFG
HEFPPNHSLKPARNSVDDAHLRPNSDGPVYELEVRFPEENKYPLQAPLVAFYSTNENLPL
ACRLHIAEFLYGKALIAAESNEPVVYTLVACLEDGSEISELLKNTHHKYSVPPVSLLATP
SVKLQTEGTSGSTQMSEASTVSEPQEEEEVAEEEEDDEPEQVVVENESYVNLKKKLSKKY
DVQAKSLYNENVKICRQFRLKKSSRHFQSMLYERQKLPAWQERETILDLLKRHQVLVVSG
MTGCGKTTQIPQFILDASLQGSPSRVANIICTQPRRISAISVAERVAKERTERIGLTVGY
QIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQGVTHVIVDEVHERTEESDFLLLVLKDI
MVQRPDLCIILMSATLNAELFSEYFHSCPIINIPGRTFPVDQFFLEDVIAMTRYVLEDSS
PYKRKTKQENKQNGRHKRTAFEEVEEDLRRAGILESTDTVVRDSDPDQKLTLKQLLTRYK
GVNKTVLKTMSVMDLDKVNLELIEALLEWIVAGKHSYPPGAVLIFLPGLAEIKMLYEQLQ
SNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYV
IDSGKMKEKRYDPSKGMESLEDTFVSKASALQRKGRAGRVASGVCFHLFSSHHYNHQLIK
QQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTP
DEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDKREEAN
KKKLEFAVGNSDYLALLQAYKGWCLSIKEGSQASYNYCKENFLSGRVLQEIASLKRQFTE
LLSDIGFVKEGLRARDIEKKWSQGGDGVLDATGEEANSNAENIKLISAMLCAALYPNVVQ
VKKPEGKYQKTSTGAVKMQPKAEELKFITKNDGYVHIHPSSVNYQTRHFESPYLVYHEKI
KTSRVFIRDCSMVSVYPLVLLGGGQVHMQLQKGEFVISLDDGWIRFVAASHQVAELVKEL
RCELDQLLQDKIKNPSMDLCMCPRGSRIIGMIVKLVTTQ
NT seq
4081 nt
NT seq
+upstream
nt +downstream
nt
aggaaagcccaacagaggaggaggaagagggagaggaggcagtggaagaggaagaggagg
tggcagcagtggccattcaaacaagtctcaacttggtagaaataggaaatgttcaaccaa
aatctgggatgatggagatgacttttgtctcttcgaggaaccaaggctagaatccagatc
aaatgcctctgccagaagaggagggcaaaaacaacagagacctgaagcaagaatgcctct
gcagaccatacatatgacatcagagaatcagagaagagtgaaggaacttcttcaagagct
tcaagggcaggagctggctcctgaatcagaagtagctggttctggtgaagatgatgatga
acctgattaccttgatgatgaacagtgctggtcaacagacctggaagtttctgacataat
accaaggtcatctgctgagccagctgaggacagaattgtggaaagtgaagtgtcttcatt
tgctgtgcacaaactctccaggtatggttttgacagtgagcgttgtaggagaatactgag
atcctgcaatggtaatattggggcatcactggagtatttgctattgcagtgctttaccga
aagatatggagagaaggtgcaggtttttccaacagctgctgaagccagtcaagaagaatg
tttagaacagagacaagaagaggcttttgccctccgctcaatctatggagaaaaatttgt
agaaagaattcaaaaccgtgtttggacttttagtttggaattggagtacctagaaaacag
gctcagcaaatctaaacaaaagggtagttgttctagggatgcagcaaagcagacttcaaa
ggaaatatgtaaattttatcttcaaagaggctgcaggtttggttcaaaatgtaggtttgg
acatgaattccctccaaaccactcactgaaaccagccaggaactctgtagatgatgctca
tctcagacctaacagtgatggtcccgtatatgaacttgaagtaagatttcctgaagaaaa
caagtatccactccaggcacctcttgtggcattttattccaccaatgagaatctacctct
tgcttgtcgtttacacattgctgaattcctctatggaaaggccttgatagctgcagagtc
taatgagccagtggtgtacaccttagtggcttgcttagaagatggatctgaaataagtga
attacttaaaaatactcaccacaagtatagtgttcctcctgtgtccctgctggcaacacc
ttcggtaaagctacagacagagggtacatctggttcaactcaaatgtctgaagcctcgac
agtgtcggagcctcaggaagaagaagaggtggcagaagaggaggaagatgatgagcctga
acaagttgttgtggagaatgagagttatgtgaacctcaagaaaaagctttccaaaaaata
tgatgtgcaagcaaagtctctgtataatgaaaatgttaaaatctgcaggcaatttcggct
gaagaagtcttctaggcatttccagtccatgttgtatgaaagacagaagctccctgcatg
gcaagagagagaaactattcttgatttgctgaagaggcaccaagttcttgttgtgagcgg
catgacgggatgtgggaaaactactcagattcctcagtttattttggacgcttcattgca
aggatctccaagcagagttgcaaacatcatctgcactcagcctcgcagaatctctgctat
ttctgtggctgaacgtgtagccaaagaaagaacagaaaggattggactcactgttggata
tcagatccgtctagaaagtgtaaagtcctcagctaccagactcttgtactgcactacagg
tgtgctgttgagaaggctggaaggagatctgactttgcagggagtcacacatgttattgt
tgatgaagttcacgaaagaacagaagaaagtgacttcttgctgctggttttgaaggacat
aatggttcagaggccagacctatgcattatactaatgagtgccaccttgaatgcagagct
tttttctgaatactttcactcctgtccaattattaacataccaggtcgaacatttcctgt
ggatcagttttttctggaagatgtgattgcaatgacaaggtatgttttagaggacagtag
tccctacaagcgtaagacaaagcaagaaaacaaacagaatggaagacacaaaagaactgc
atttgaagaagtagaggaggacctgagacgtgctggcattctggaaagcactgacacagt
tgtcagagattcagacccagaccaaaaattaaccctgaagcagcttcttacacgatacaa
aggggttaacaagacagtgttgaaaacgatgtctgtcatggacttggacaaagttaatct
ggaattaattgaagccttgctggagtggatagttgctggcaaacattcctaccccccagg
tgccgtgttgatatttttgcctggtctagcagaaatcaagatgctttatgagcagctcca
gtctaatgctctttttaataacaggcacagcaagaggtgtgttgtttatccacttcattc
ttcactgtctagtgaagaacagcagtctgtgttcctcaggcctcctgcaggagttatcaa
aatcatcatctctacaaacattgcagaaacatctgttaccattgatgatgtggtctatgt
gattgattctggaaaaatgaaagagaaaagatacgacccaagcaaaggaatggaaagtct
ggaagacacatttgtgtccaaggccagcgctctgcaaaggaaagggcgagcaggccgtgt
agcctcaggcgtctgctttcatcttttcagtagccatcactataaccatcagcttataaa
acaacagttaccagaaatacaaagagtgcccttggagcagctttgtctaagaattaagat
tctggagatgttttctgcacagagtcttcactctgtcttatcacgactaattgagccccc
tagaactgagtctttgcgagcgtcaaagctgcgactacaagacttgggagcattgacccc
agatgaaaagctcacccctctgggttatcacttggcttctctgcctgttgatgtcaggat
tggcaagctaatgctgtttggcaccatcttccgctgcctggatcctgcactaactatagc
agccagtctggccttcaagtcgccttttgtgtcaccatgggataaaagggaagaagcaaa
caaaaagaagttggagtttgcagtaggaaacagtgactacctggctcttctccaggccta
caagggatggtgtctaagtatcaaagagggctctcaggcaagctacaactactgcaagga
gaactttctgtcaggaagagttcttcaggaaattgccagcttgaaacggcaattcacaga
actgctttctgacattgggtttgtgaaggaggggttaagagccagggatattgagaagaa
gtggtcccaaggaggcgatggcgtgttggatgccacaggagaggaggcaaattcgaatgc
agagaacatcaagctgatctcagctatgttgtgtgctgcactgtatcccaatgttgtcca
ggtgaaaaagccagagggcaaataccagaaaacaagtaccggagcagtcaaaatgcaacc
aaaagcggaagagctgaagtttattaccaaaaatgatggttatgttcacattcacccttc
atctgtgaattatcagacgaggcacttcgagagcccctacctggtgtatcatgagaaaat
caagaccagccgtgtgttcattcgagactgcagtatggtgtcagtgtacccgctggtcct
gcttggaggtgggcaggttcacatgcagctgcagaagggcgaatttgtcatctctcttga
tgatggatggatacggtttgtggccgcctctcaccaggtcgctgagctggtgaaggagct
gcgctgtgaactggaccagctgctgcaggacaaaatcaagaatcccagcatggatttatg
catgtgcccccgtggatctcggatcattgggatgattgtaaagcttgtgaccacccagta
a
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