Phalacrocorax carbo (great cormorant): 104047273
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Entry
104047273 CDS
T08596
Symbol
SMC2
Name
(RefSeq) structural maintenance of chromosomes protein 2
KO
K06674
structural maintenance of chromosome 2
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcao03036
]
104047273 (SMC2)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
104047273 (SMC2)
Condensin II
104047273 (SMC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
MscS_porin
IntS11_C
Motif
Other DBs
NCBI-GeneID:
104047273
NCBI-ProteinID:
XP_009505858
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MHMKSIVLDGFKSYAHRTEIRDFDPLFNAITGLNGSGKSNILDAICFLLGITNLSQVRAS
NLQDLVYKNGQAGIHKATVSITFDNSDKKVSPLGFEGSDEITVTRQVVVGGKNKYLINGV
NATNGRVQDLFCSIGLNVNNPHFLIMQGRVTKVLNMKPPEILGMIEEAAGTKMYESKKIT
VQRTIDKKDAKLKDIQMVLDEEITPTLEKLKEERASYLEYQKLTRSIEHLKRLSIAYQFV
VAERKKVSCAEALKEMLSNVEKFRESIDESAKKVKQLNEEIAGMEKERDKEVGGVLRSLE
DALSELQRVHARAQSAFDLKKQNLKNEENKYNELVKSMQEDSETLMSKEKKVKEIENELH
ALQETSKKDADALAEAQQRFNAVSAGLSSSGDGEEATFAGQMMTCKNEVSKAETEAKQAQ
IKLNYAQEELKTKEAELKKMDGSYKKDREALQAVRKTKDMLEDQMKKLNYEEGKEETLLA
KKKALTCDISRLKQLYEGLMAKFPHLRFEYRDPEKNWNPDRVKGPVVSLIVVKDLSKARA
LEVVAGGKLYNIVVDTEDTGKKLLQRGELKHRYTIIPLNKISARCIGEDTVKLAQTLAGR
DNLYIALSLIEYEPELQKAIEYVFGTTLICNNMDNAKKVTFDKRIMMRTVTLDGDVFDPQ
GTLHGGASSQVVPILSKLREIKNIAAEIRAKESELEAIETELKRLKNVAEKYWQLKQQWE
MNSEEAELLQTKLHQSAYHKQEEELLALKKTIAECEETLKTSKESQKKAEDKYKELENKM
KNAEAEYEKERKNAQNKLDDAKKNADTSSKKMKEKQQEVAALLLEVKELKQEHASYEQQI
AAAANAARSYQEQVNTMAAEVSKTKESVEKSQKELTKQKEVILLQDEAIKAKSAEMLKYR
EQINDLQLKVKALEHDISKYQEEIAEATAKVTKMLEEYEWIASEKQLFGQPHTAYDFKAN
NPTEICQKLQKLQEIKQELGKKVNMQAMNMLSETEERYNDLLRKKRIVENDRAKILATIQ
ELDDKKAKAIQIAWKKVNEDLGSIFSTLLPGAKAMLVPCKTQNVLDGLQFRVALGNTWKD
NLTELSGGQRSLVALSLIFSMLLFKPAPIYILDEVDAALDLSHTQNIGQMLHAHFRRSQF
IVVSLKDGMFSNANVLYQTRFLDGVSTVERYEQCRSRYNSGAHKKAQKALNSSKTGPIAL
ALPQIA
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgcacatgaaatcaattgttcttgacggatttaaatcctatgctcacaggacagaaatt
cgtgactttgacccgttattcaatgctattactggcttgaatggtagtggcaagtccaat
atcttggacgcaatctgtttcctgttgggaatcaccaatctgtcacaggtgcgagcttct
aacttgcaagacctagtttataaaaatgggcaagctggaattcataaagcaaccgtgtcc
attacctttgataattctgacaagaaagtaagtccactgggatttgaaggtagtgatgag
atcactgtcactaggcaggttgtcgttggaggtaaaaataagtatcttatcaatggtgtg
aatgcaaccaatggtcgcgtgcaggatctcttctgttctattggtctcaatgtcaataac
cctcacttcctcattatgcagggacgagtgaccaaagttctaaatatgaagccaccggag
attttaggtatgattgaagaagcagctggcactaagatgtatgaaagcaagaaaataact
gtccagagaaccatagataagaaggatgccaaactgaaagacattcaaatggtgttagat
gaggagatcactccaactttagaaaaactgaaagaggaacgagcatcctatctagaatac
caaaaattaacacgatcaatagaacatttaaaacgcctctctatagcttatcagtttgtt
gtggctgaacggaaaaaggtatcctgtgctgaagcattaaaggaaatgctgagtaatgta
gagaagtttcgggaatcgatagatgaaagtgcaaagaaggtgaaacaacttaatgaagaa
atagcggggatggaaaaggaaagggataaggaagttggtggtgtgctccgttcactggaa
gatgctctttcagaacttcaaagggttcatgctagagcacaaagtgcctttgatctcaag
aagcagaacttaaaaaatgaagagaacaagtacaatgagctggtaaaaagtatgcaggag
gattctgaaacattaatgtcaaaggagaaaaaagtaaaggagatagagaacgaactacat
gcgttgcaggaaacaagtaaaaaagatgcagatgctttagctgaagcacaacagcgtttt
aatgctgtgtccgctggcttgtccagcagtggcgatggggaagaagctacttttgctggg
cagatgatgacctgcaaaaatgaagtcagcaaagctgaaacagaggctaaacaggctcaa
ataaagttgaattatgcacaagaagaattaaagacaaaagaagctgaacttaaaaagatg
gacggaagctacaagaaagaccgagaagcacttcaagctgtcagaaaaacaaaagacatg
ctagaggaccaaatgaagaagctgaactatgaagaagggaaagaagaaacccttttagca
aaaaagaaggcgttgacttgtgacatcagccgactgaaacaattgtatgaaggcttaatg
gcaaagtttcctcatctacggtttgaatacagagacccagaaaaaaattggaatccagac
cgtgtgaaaggccctgttgtgagtcttatcgttgtgaaagatctatccaaagcaagagcc
ttagaagtggtggctggagggaaactgtataacattgttgtggacacagaggatactggc
aaaaagcttttgcagaggggtgaactaaagcatcgatacaccatcattccactaaacaaa
atttcagccaggtgtattggagaagacactgtcaagttggcacaaaccttggctggtcgt
gataacttgtatatagccctttctctgattgaatatgaacccgaactgcagaaagcaatc
gaatatgtgtttggaacaaccctgatctgtaataacatggataatgccaaaaaagtgacc
tttgacaaaaggataatgatgagaactgtcacacttgatggagatgtatttgacccccag
ggcactctgcatggaggtgcgtcctcacaggttgtaccaatattgtctaaacttcgagaa
attaaaaacattgcagcagaaatcagggcaaaggaatctgaacttgaggctatagagacc
gagttgaaaagattgaagaatgttgctgaaaagtattggcaactgaagcagcagtgggag
atgaattctgaagaagcagagctattgcaaacgaagcttcatcaaagtgcttatcacaaa
caagaggaagagctgcttgccctgaagaaaacaattgctgagtgtgaggagacattgaag
acaagcaaagagagccaaaagaaagcagaagataaatacaaggaattagagaataaaatg
aaaaatgcagaagcagaatatgaaaaagaacgaaaaaatgcccagaacaaactagatgat
gccaagaaaaatgcagacacttcaagcaaaaaaatgaaggaaaagcagcaggaagttgca
gctttacttctggaagttaaagagctaaaacaagagcatgcctcctatgaacaacagata
gcggctgcagctaatgcagccagatcctaccaggagcaagttaatactatggcagctgag
gtgtctaagacaaaggaatctgtagagaagtcacagaaggagctgaccaagcaaaaggaa
gtaattttgttacaggatgaagcaattaaagctaaatctgcagagatgctaaaatacaga
gaacaaattaatgacttacagcttaaggttaaagcattagaacatgacatcagcaaatat
caggaagagattgctgaggctactgccaaggtgaccaaaatgctggaagagtatgagtgg
atagcttcagagaaacagctttttggtcagccacacacagcctatgacttcaaagctaac
aatcctacagaaatatgtcagaagctgcagaaattgcaggagattaaacaggagctggga
aagaaagtgaacatgcaagctatgaatatgctttctgagacagaggagaggtacaatgac
ttactgaggaaaaaaagaattgtagagaatgacagggcaaaaattcttgcaactattcaa
gagcttgacgacaagaaagctaaagctatacagattgcatggaaaaaggtgaatgaagac
cttggttcaattttctcaacgcttctaccaggagccaaagctatgctagtaccttgtaaa
acccagaatgtcttggatggtctgcagttcagagttgccttaggaaacacctggaaggat
aacttaacagaacttagtggaggacaaagatcattggtggccttgtccttgatcttttcc
atgcttctcttcaaacctgccccaatttacatcttggatgaagtggatgcagcccttgac
ctctctcatacccagaacattgggcagatgctgcacgctcatttcagacgctctcagttt
atcgtggtgtccttgaaggatggaatgtttagcaacgcgaatgtcctgtaccagaccagg
tttctggatggtgtatccactgtggaaagatatgaacagtgtcgaagcagatataattca
ggtgcccacaagaaagcccagaaggcactcaacagtagcaaaacaggacctatagcgctg
gcactgcctcagatagcatag
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integrated database retrieval system
