Phalacrocorax carbo (great cormorant): 104050156
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Entry
104050156 CDS
T08596
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcao03000
]
104050156 (SOX6)
Transcription factors [BR:
pcao03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104050156 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104050156
NCBI-ProteinID:
XP_009509255
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
QLYAAQLASMQVSPGAKMPSTPQPPNTTGALSPTGMKNEKRGTSPVTQVKDEAAQPLNLS
ARPKTAEPVKSPTSPTQNLFPASKSSPVTVTNKSGIPSPLGGSLGRGSSLDILSSLNSPA
LFGDQDTVMKAIQEARKMREQIQREQQQQQQPHGVDGKLSSMNNMGLNNCRNEKERTRFE
NLGPQLTGKPNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARV
YRDSRGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEK
QPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTV
GQQPQIPITTGTGVVYPGAISMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYGMKTDSG
SLAGNEMINGEDEIEMYEDYEDDPKSDYSSENEAHEAVSAN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
caactgtatgcagctcagctggcaagcatgcaagtttctcctggagccaaaatgccatct
actccacagccaccaaatacgacaggggcactctcacccactgggatgaaaaatgagaag
agagggaccagcccggtaacccaagttaaggatgaagcagcccagccactgaatctttca
gcccgacccaaaacagctgaacctgtcaaatccccaacatctccaacacagaacctcttc
ccagccagtaaaagcagtccagtgacagtgacgaacaagagtggcatccccagcccgctc
ggtggatctctgggaagaggatcctctttagatatcctttccagtcttaattcacctgcc
ctatttggggaccaggacacagtaatgaaagccattcaagaggctcgaaaaatgagagag
cagatccaaagggagcagcagcagcaacagcagccgcatggtgttgatggaaaattgtcc
tccatgaataacatgggcctaaacaactgcagaaatgaaaaggaaagaaccaggtttgaa
aatttaggcccacagttaacaggaaaacccaatgaagatggaaaactgggccctggtgtc
atcgatcttacaaggccagaagatgcagaaggaagtaaagcaatgaatggctctgcagct
aaactacagcagtattattgttggccaacaggaggtgccactgtggctgaagctcgagtc
taccgggattcgcggggccgagccagtagtgaaccgcacatcaaacgaccaatgaatgct
ttcatggtttgggcaaaggatgaacgtcgaaaaattctccaagcgttccctgacatgcac
aactccaacattagcaaaatcctaggatctcgctggaagtccatgtcaaatcaagagaaa
caaccttattacgaagagcaggcacggctaagtaaaatccacctagaaaagtatcctaat
tacaaatacaaacctcgaccaaaacgtacctgcattgttgacggaaagaaattgcgtatt
ggtgaatacaaacaactgatgaggtctcgaagacaggagatgaggcagttttttaccgta
ggacaacagcctcaaattccaatcaccacaggaacgggggttgtctatcctggtgctatt
tccatggcgactaccacgccatcacctcagatgacatcagattgctcgagcacctctgcc
agccctgagcccagcatccctgtcattcagagcacttatggtatgaagacggacagcgga
agccttgctggaaatgaaatgataaatggagaggatgaaatagaaatgtacgaggactat
gaggatgatcccaaatcagactatagtagtgaaaacgaagcccatgaggcagtcagtgcc
aactga
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