Phalacrocorax carbo (great cormorant): 104051249
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Entry
104051249 CDS
T08596
Symbol
CNGA1
Name
(RefSeq) LOW QUALITY PROTEIN: cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
104051249 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcao04040
]
104051249 (CNGA1)
Ion channels [BR:
pcao04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104051249 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
CDC45
DUF2207_C
Presenilin
Connexin
SLC52_ribofla_tr
SlyX
Sec62
BSMAP
Ribosomal_S2
Menin
Zip
Motif
Other DBs
NCBI-GeneID:
104051249
NCBI-ProteinID:
XP_009510565
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MKVGVIETHHSHTTVPSVVVQDTSEEPGPMNKVENRYARQQYLPGTFAHYNINNNSNKDE
XKKKKKEKKSKSERKKDGENPKNKEKKEKNKTKDKSKKKENKEEKKKDIFIIDPAGNMYY
NWLFCITMPVMYNWTMIIARACFDELQHDYLVAWFIIDYVSDVIYVVDMFVRTRTGYLEQ
GLLVKEEQKLREKYKASFQFKLDFLSIIPTDLLYFKLGLNYPELRINRLLRVARMFEFFQ
RTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSDPEFARLT
RKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVIDFLVGVLIFATIVGNVGSMISNMNAA
RAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIA
INVHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLAV
VADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALT
EYPDAKAMLEEKGKQILMKDGLLDIEVANSGSDPKDLEEKVTYMERSMDRLQTKFARLLA
EYEAAQQKLKKRLTQIEKVLKPVIEQEFAHLEEGDPSTDKPGV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggagtgattgagacccatcactcccatacaactgtacccagcgtggtagtg
caagacaccagtgaggaacctggaccaatgaacaaagtggaaaacaggtatgctagacaa
cagtatctacctggcacgtttgcacactacaatattaacaacaatagtaataaagatgag
taaaagaaaaagaaaaaagaaaagaagagcaagtcagaaagaaaaaaggatggagaaaac
ccaaagaacaaggaaaaaaaggagaaaaacaaaaccaaagataagtccaagaagaaagaa
aataaagaagagaagaagaaagatattttcattattgatccagcaggaaatatgtattac
aactggttgttttgcatcacaatgcctgtcatgtacaactggaccatgattattgctaga
gcctgttttgatgagcttcagcatgactacctagtggcatggtttattattgactatgtt
tccgatgtcatctatgttgttgacatgtttgtacggacaagaacaggttacctggagcaa
ggtcttctggtgaaagaagaacaaaagcttcgagaaaaatacaaggcatcttttcaattc
aaattagattttctgtcaatcataccaaccgatctcttatactttaagttaggactgaat
tacccagaattaagaataaacagattactcagagtagctcggatgtttgaattcttccag
cgaacagaaacaaggacaaactacccaaatatcttcaggatctctaaccttgtcatgtac
attgtgattattattcactggaacgcctgtgtgtactactcgatctcaaaagccattgga
tttggggctgacacatgggtctaccccaacacctccgatcctgaatttgcccgtctgact
agaaagtatgtctacagcctctactggtcaacactgactctgactactatcggtgaaaca
ccccctcctgtaagagattcagagtatttctttgtggtcattgacttcttggttggagta
ctgatttttgctaccattgttggtaatgtgggctctatgatctccaacatgaatgctgcc
agggcagagtttcaagcaaggattgatgctatcaagcagtatatgcacttccggaatgtt
agtaaagacatggagaaaagagtaataaagtggtttgactacctgtggacaaataaaaag
gctgtggatgaaagggaagtcttgaagtacctgccagacaaactaagagcagagattgca
atcaatgttcatctggaaacactaaaaaaagttcggatttttgcagactgtgaagctggt
ctgttggttgaactggttttgaaactccagccgcaagtatacagtcctggagattatatt
tgcagaaaaggagatattggacgagagatgtacattatcaaagaaggcaagctggctgta
gtcgctgatgatggaatcacccaatttgtggtcctaagtgatgggagctattttggagaa
atcagcattcttaatatcaaaggtagcaaagctggcaatcgaagaacagccaatattaga
agtattggatactcggacttgttttgcctgtctaaagatgatctcatggaggctttaaca
gagtatccagacgcaaaggctatgctggaagaaaaaggcaagcaaatcctaatgaaagat
gggttgctggacattgaagttgcaaattcaggaagtgatcctaaagatctggaagagaag
gtcacctacatggaaagatcaatggacagattacaaacaaagtttgccaggttgttggct
gagtatgaagctgcacagcagaaactgaaaaaaagacttacacaaatcgagaaagtattg
aagccagttatagagcaagaatttgcacacttagaagaaggcgatccatccacagataaa
cctggagtgtaa
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