Phalacrocorax carbo (great cormorant): 104053107
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Entry
104053107 CDS
T08596
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcao01002
]
104053107 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcao04121
]
104053107 (USP47)
Enzymes [BR:
pcao01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104053107 (USP47)
Peptidases and inhibitors [BR:
pcao01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104053107 (USP47)
Ubiquitin system [BR:
pcao04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104053107 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Ubiquitin_2
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
104053107
NCBI-ProteinID:
XP_009512796
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MFWSCRQSIFAEMKKKFSQVESAAEEPRVLCIIQDTTNSKTVNERVTLNLPASTPLKRLF
EDVASKVGYVNGTFDLVWGNGDNVTDTTPIDQNSDKTILDAGFEPGKKNFLHLTDKDGEQ
PHIMPEESGTTDDSVQDRFIGPLPREGSVGCTNDYVSQNYSYSSVLSKSETGYVGLVNQA
MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFILLQTSKKRAIETT
DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLEC
GYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDAR
KGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMNVFIDVEDEKSPQTESC
TDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGSEKSSLLYELFSVMV
HSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSRGYYSSAFASST
NAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQREIERNTCKIKLFCM
HPTKQIMMENKLEVHKDRTLKEAVEIAYKLMDLEEAVPLDCCRLVKYDEFHDYLERSYEG
EEDTPMGLLLGGVKSTYMFDLLLETRRPDQIFQCYKPGEVMVKVHVVDLKTESVASPISV
RAYLNQTVSEFKQLISKATHLPAETMRVVLERCYNDLRLLNISSKTLKAEGFFRSNKVFI
ESSESVDRHVAYTDSHLWKLLDRHANTIRLYVSLPEQSPGSQFRRAVYQKSSGDSGNLDE
ACERVKGPVGNMKSVEAILEESTEKLKSLSLQQHQEGDNGDSSKSTEASDFENIESPLNE
IDSSASAENRELENQIQISDPENLQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNV
DNAPLPLANGLDSHSITSSRRSKVNQGKKETWDTAEEDSGTDSEYDESGKSRGEAQYMYF
KSEPYAADEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHFKVFRVYASNQEFES
VRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLLDAVFAKGMTVRQ
SKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEILD
GVEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSEVSGIPLENIEFAK
GRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQRNE
LMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgttttggagttgcagacaaagtatttttgctgaaatgaagaagaaattttcacaggtg
gaaagtgctgctgaggaacccagggtactgtgtataatacaagataccacaaattcaaag
acagtaaatgagcgtgttaccttgaacctgccagcttccacaccacttaaaaggctgttt
gaagatgtggcttcaaaagtgggctatgtgaatggaacttttgatctagtgtggggaaat
ggagataatgtaactgatacgactccaatagatcagaacagtgacaaaactattcttgat
gctggttttgagccagggaagaagaactttctacatttgacagacaaagatggtgagcaa
cctcatataatgccagaggagtcaggtacaacagatgacagtgtgcaagacagatttata
ggccctcttccaagagaaggttctgttggctgtactaatgactatgtcagtcaaaactac
tcttattcttcagtcctgagcaaatcggaaacaggttacgtggggctagtaaatcaagca
atgacttgctacttgaacagccttctacaaacgcttttcatgactcctgaatttagaaat
gcgttatataaatgggaatttgaagaatctgaagaggatcctgtgacgagtatcccctac
cagcttcaaaggctgtttattttactgcagaccagcaaaaaaagagcaattgaaacaaca
gatgtcacacggagttttggatgggatagtagtgaggcatggcagcaacatgatgtacag
gagctttgtagagtcatgtttgatgctttggagcagaagtggaagcaaacagaacaggct
gatcttataaatcaactgtatcaaggcaaactaaaagactatgtaagatgtctagaatgt
ggttatgaaggctggagaatcgacacttacctggatattcctttggtcatccggccgtat
ggctccaaccaggcatttgctagcgtggaagaagcactacatgctttcattcagcctgag
attcttgatggccccaatcagtatttttgtgaacgatgtaagaagaaatgtgatgcaagg
aagggtctgcggttcttgcattttccgtatctgctgacgttacagctgaagagatttgac
ttcgattataccactatgcacagaattaagctcaacgatcgtatgacttttcctgaggag
ttagacatgaatgtcttcattgatgttgaagatgagaagtctcctcagactgagagttgc
actgatagcggagctgaaaatgaaggcagttgtcacagtgatcagatgagcaatgatttt
tctaatgatgatggagttgacgaaggaatctgccttgaaagcaatagtgcagcagaaaga
atttctaaagctggcagtgaaaagagttctttgctgtatgagctcttttctgttatggtt
cattctggaagtgctgctggtggccattattacgcgtgtataaaatctttcagtgatgac
cagtggtacagctttaatgatcagcatgttagcaagataactcaggaagatattaagaaa
acatacggtggatcttctggaagcagaggctattattccagtgcttttgctagctccaca
aacgcatacatgctgatatatagactgaaggatccaacaagaaatgcaaagtttcttgag
gcacatgagtacccggagcatattaaacaattagtacagaaagagagagaattggaagaa
caagaaaagaggcaacgtgaaattgagcgcaacacttgcaagattaaactgttctgcatg
catccgacaaaacaaataatgatggagaataaattagaggttcataaggacaggacactg
aaggaagctgtggaaatagcttacaagctaatggatttagaagaggctgttcctttggat
tgctgtcgtcttgtcaaatatgatgagttccatgactacttggaacgatcttacgaagga
gaagaggatacaccaatgggtttactacttggaggtgtcaaatcaacgtacatgtttgac
ttgctgttggaaacaagaagacctgaccaaattttccagtgctataaacctggtgaggtc
atggtaaaggttcatgtagttgacctaaagactgaatctgttgcttctccaataagtgtc
cgagcttatttgaatcaaacagtttcagaattcaagcagctaatttcaaaggctacgcac
ctgcccgctgaaacaatgcgggtagtattagaacgttgctacaatgacttgcgtcttctg
aacatttccagcaaaacactgaaagccgaaggcttttttagaagcaacaaggtatttatt
gaaagctcagagtctgtagatcgtcatgtggcatatacagattctcatttatggaaactt
ttggatcgtcatgcaaatacaatcagactgtatgtttcattaccagagcaatcgcctgga
tctcagtttagacgagcagtttatcagaagtctagtggagattcaggcaacttggatgaa
gcctgtgaaagagtaaaaggacctgtaggtaatatgaaatctgtagaggcaattctggaa
gaaagcacagaaaagcttaaaagcttgtccctgcagcagcaccaggagggggataatgga
gacagcagcaaaagcacagaagccagtgattttgaaaacatagaatcacctttaaatgaa
atagactcttcagcatcagcagaaaacagagaacttgaaaaccaaattcagatttctgat
ccagaaaatctccagtcggaggaacggtcagattcagatgtaaataatgacaggagtaca
agttcagtggacagcgatatcctcagctccagtcatagcagtgatacattatgcaacgtg
gacaatgccccgctccccttggctaatggacttgattctcatagtatcacaagtagtagg
cgatcaaaagtaaatcaggggaagaaagaaacctgggacacagcagaagaagattctgga
acagatagtgaatacgatgaaagtggcaagagcagaggagaagcacaatatatgtacttc
aagtcagaaccctatgctgcagatgaaggttcgggagaagggcaaaaatggctgatggtg
catgttgacaaaagaattacgctgtctgccttcaaacaacatttggagccttttgttgga
gttccatcttcacacttcaaagtctttagagtctacgccagcaatcaagagtttgagagt
gttcggctgaatgagacactttcatcattttctgatgacaataagataactattaggctt
ggaagagcccttaagaagggtgaatacagagtcaaagtctatcagcttttggtaaatgag
ccagagccatgcaagtttcttctagatgcagtttttgcaaaaggaatgactgtccgacag
tcaaaagaggagctgcttccccagcttcgagaacaatgtggcctagacttgacaattgac
aggtttcgcctacgaaagaaaacctggaagaacccaggcactgtgtttctagattatcat
atatatgaggaagatatcaatatttcaagcaattgggaggtcttcttggaaatacttgat
ggagtagaaaagatgaaatccatgtcgcaacttgctgttttatcaagacgatggaggcca
tcagagatgaaattggattctttccaggaagtagtgctagaaagcagcagtgttgaagaa
ctaaaagagaagctgagtgaagtaagtggaatacccttagaaaacatagaatttgcaaag
ggtagaggaacgtttccgtgcgacatttctatactagagattcaccaagacttggactgg
aatcctaaagtatctacattgaacgtctggcctctctacatttgtgatgatggtgcagta
atattttatagggataaaactgaagaattaatggaattaacggatgagcagagaaatgaa
ctgatgaaaaaagagagcagcagactccagaaaactggacaccgtgtaacctactctcct
cgtaaagaaaaagcactaaaaatttatctggatggagcaccaaataaagatttgactcaa
gactga
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integrated database retrieval system
