Pseudoalteromonas carrageenovora: PC2016_1857
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Entry
PC2016_1857 CDS
T06565
Name
(GenBank) 16S rRNA (cytosine1407-C5)-methyltransferase
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcar03009
]
PC2016_1857
Enzymes [BR:
pcar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
PC2016_1857
Ribosome biogenesis [BR:
pcar03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PC2016_1857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
Methyltranf_PUA
YebU_pre-PUA_dom
RsmF_methylt_CI
Methyltransf_31
VMAP-M12
Motif
Other DBs
NCBI-ProteinID:
QBJ72063
LinkDB
All DBs
Position
I:2113356..2114807
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AA seq
483 aa
AA seq
DB search
MNANTYIPEHFIDDVKTYLPAHLNLDDFINACRRPLRKSIRVNTLKISVAEFKHRAEQKN
WQLTPIPWCSEGFWLERPSDEEQNLALGNTDLHLSGAMYVQEASSMLPPMALKQSIENLD
LQDGYVLDMASAPGSKTSQLAAIMNNQGVLVANELSSSRLKVLSATLKRMGVGNCALSHF
DGVIFGNYMFECFDSILLDAPCSGEGTVRKDADALKNWSIESNIEIAQVQKDLIKSAFYA
LKPGGTLVYSTCTLTPLENQNVCNYLLSEFGDYIEPQSLSDLFKGAEKATTAEGYLHVWP
QTFDSEGFFIAKFKKLASCNNPTQSVKKGAFPFNEFDKKQTTSFMSELKKQFGLKALPGK
LMQRDKELWLFPDGFEAVQNKIKYARLGIQIGIIHKNGVRLTHEFATVFGNECKSNTYAL
TNKQANDYFNGKDIRLEDVTKASGEVVLTLCGCPIGLGKWQKNKIKNSLPRDLVQNTQLI
SWV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccaacacttatattcctgagcactttattgacgacgtaaaaacctatttacct
gcgcacctcaatttagacgactttataaacgcgtgccgtcgccctctcagaaaatctatt
cgtgtaaatacattaaaaattagtgttgctgaatttaaacaccgtgcagagcaaaaaaac
tggcaacttacacccataccttggtgtagtgagggtttttggctagaacgcccaagcgat
gaagagcaaaacctagcattaggcaataccgacttacatttaagcggcgctatgtacgtg
caagaggcaagctcaatgctgccgcctatggcactaaaacaaagtattgaaaacttagat
ttacaagatggttacgtacttgatatggcatcagcgcctggctctaaaacttcgcaactt
gccgcaataatgaataaccaaggggtacttgttgccaacgagctttcgtcatcacgctta
aaagtacttagcgctacgcttaaacgtatgggggtgggtaactgcgcgctctcacatttt
gatggcgtcatatttggtaattatatgtttgaatgctttgatagcattttacttgatgca
ccctgctctggcgaaggtaccgtacgtaaagacgccgatgcccttaaaaactggtctatt
gaatcaaatatagaaattgctcaagtacaaaaagacttaataaaaagcgcattttacgca
ttaaagccaggcggaacgcttgtgtactcaacctgtacgctcaccccgcttgaaaaccaa
aatgtatgcaattatttgcttagcgaatttggcgactacattgagccgcaatcgctaagt
gatttatttaaaggggcagaaaaagccacaaccgccgagggctatttacatgtgtggccg
caaacattcgacagtgaaggtttttttatcgctaagtttaaaaaacttgcaagctgcaat
aacccaacccaaagcgttaaaaaaggtgcgtttccgtttaacgagtttgataaaaaacaa
accacttcttttatgagcgagcttaaaaaacagtttggcttaaaagcgctgccaggtaag
ttaatgcagcgcgataaagaactgtggttattccctgacgggtttgaagccgtgcaaaat
aaaataaaatacgcacgcttaggcatacaaataggcataattcataaaaatggtgtaagg
ctgactcacgagtttgctaccgtgtttggtaatgaatgcaaaagcaatacatatgcttta
acaaacaagcaagcaaatgactactttaatggtaaagatatacggctagaagacgttaca
aaagccagcggcgaagtagtactaaccttatgtggctgcccgataggactgggtaaatgg
caaaaaaataagattaaaaactctttgccacgcgaccttgtgcaaaatactcagttaata
agctgggtataa
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