Pseudomonas canavaninivorans: LOY40_01590
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Entry
LOY40_01590 CDS
T08625
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pcas
Pseudomonas canavaninivorans
Pathway
pcas00521
Streptomycin biosynthesis
pcas00523
Polyketide sugar unit biosynthesis
pcas00541
O-Antigen nucleotide sugar biosynthesis
pcas01100
Metabolic pathways
pcas01110
Biosynthesis of secondary metabolites
pcas01250
Biosynthesis of nucleotide sugars
Module
pcas_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LOY40_01590 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LOY40_01590 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LOY40_01590 (rfbC)
Enzymes [BR:
pcas01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LOY40_01590 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UVM72900
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Position
complement(360909..361454)
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AA seq
181 aa
AA seq
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MNVIATRLPDVLIIEPKVFGDERGFFYESFNAQAFAEATGRVVQFVQDNHSRSAKGVLRG
LHYQIEHSQGKLVRVTEGEVLDVAVDIRRSSPTFGQWTSVRLSGQNHRQLWIPPGFAHGF
VVLSESADFLYKTTDYYAPSAERCIRWDDPELAIDWELQGTPILSAKDQAGSALREADLF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtcatcgccacccgcctgccggatgtcctgatcatcgagccgaaggtcttcggc
gacgaacgcggttttttctatgaaagcttcaacgcccaggcgttcgccgaagccactggc
cgcgtggtgcaattcgtccaggacaatcattcgcgttccgccaagggcgtgctgcgcggc
ctgcattaccagatcgaacattcccaggggaaactggtgcgcgtcaccgaaggtgaggtc
ctggacgttgcggtggacattcgccgcagctccccgactttcggccagtggacaagcgta
cgcctgtcgggacagaaccatcggcagctgtggattccgccaggattcgcccatggattc
gtggtactgagcgagtcagccgattttctctacaagaccaccgattactacgctccatca
gctgaacgctgcattcgctgggacgatccggaactggcgatcgactgggaactgcagggc
acgccgatcctgtctgccaaggatcaggccggcagcgcccttcgagaggccgacctgttc
ccatga
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