Pseudomonas canavaninivorans: LOY40_22000
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Entry
LOY40_22000 CDS
T08625
Symbol
emhB
Name
(GenBank) efflux RND transporter permease subunit EmhB
KO
K18138
multidrug efflux pump
Organism
pcas
Pseudomonas canavaninivorans
Pathway
pcas01501
beta-Lactam resistance
pcas01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOY40_22000 (emhB)
01503 Cationic antimicrobial peptide (CAMP) resistance
LOY40_22000 (emhB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcas02000
]
LOY40_22000 (emhB)
01504 Antimicrobial resistance genes [BR:
pcas01504
]
LOY40_22000 (emhB)
Transporters [BR:
pcas02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LOY40_22000 (emhB)
Antimicrobial resistance genes [BR:
pcas01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LOY40_22000 (emhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
UVM71234
LinkDB
All DBs
Position
4918935..4922099
Genome browser
AA seq
1054 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIQVTYPGASAQTVQDT
VVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTSSDTAQVQVQNKLNLATPLLPQ
EVQQQGIRVTKAVKNFLMVIGVVSRDGSMTKDDLANYIVSNLQDPISRTAGVGDFQVFGA
QYAMRIWLDPAKLNNFNLTPVDVKNAIAAQNVQVSSGQLGGLPALPGQQLNATIIGKTRL
QTAEQFKAILLKVNPDGSQVRVGDVADVGLGGENYSVSAQFNGAPASGLAVKLANGANAL
DTAKALRKTIDDLKPFFPQGVEVVFPYDTTPVVSESIKGVVETLVEAVALVFLVMFLFLQ
NFRATIITTMTVPVVLLGTFGILAAAGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
SEEGLSPKEATKKSMGQIQGALVGIALVLSAVLLPMAFFSGSTGVIYKQFSITIVSAMAL
SVLVALIFTPALCATMLKPIPKGEHGTPKRGFFGWFNRNFDRGVRSYERGVGNMLRHKAP
YLLAYVIIVVGMIWLFTRIPTAFLPEEDQGVLFAQVQTPAGSSAERTQAVVDKMREFLLR
PSKDGGEGDAVASVFTVTGFNFAGRGQSSGMAFIMLRPWEERNADNSVFKLAGRAQQHFF
TFRDAMVFAFAPPAVLELGNATGFDVFLQDRAGIGHDKLMEARNQFLGMASQSKILSQVR
PNGLNDEPQYQLEIDDEKASALGITLSDINNTLSIALGSSYVNDFIDRGRVKKVYVQGQP
GARMSPEDLKKWYVRNSAGTMVPFTAFAKGEWVYGSPKLARYNGVEAMEILGAPAPGYST
GEAMAEVEAIAKKLPAGVGISWTGLSYEERLSGSQAPALYALSLLMVFLCLAALYESWSI
PIAVMLVVPLGIIGALMATSLRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKELHEQGR
TLMEAAIEACRMRLRPIIMTSLAFVLGVVPLAISTGAGSGSQHAIGTGVIGGMLTATILA
IFWVPLFFVTVSSMGRRKNIDQDHTPETSKEAGQ
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaattctttatcgaccgtccgatctttgcctgggtaatcgccctggtgatcatg
ctggtcggcgccctgtcgatcctcaagttgccgatcaaccaatacccgagcatcgcgcca
ccggccattgcgatccaggtgacctacccgggcgcatccgcgcaaaccgtgcaggacacc
gtggtgcaggtcatcgagcaacagctcaacggcatcgacaacctgcgctacgtgtcgtcg
gagagtaactccgacggcagcatgaccatcaccgcgaccttcgagcagggcaccagctcc
gataccgcgcaggtccaggtccagaacaagttgaacctggccaccccgctgctgccgcaa
gaagtgcagcaacagggcatccgcgtgaccaaggcagtgaagaacttcctgatggtgatc
ggtgtggtctcgcgcgatggcagcatgaccaaggacgacttggccaactacatcgtgtcc
aacctgcaggatccgatctcgcgtaccgccggtgtcggtgacttccaggtcttcggcgcg
caatacgcgatgcggatctggctcgacccggccaagttgaacaatttcaacctgaccccg
gtggatgtgaagaacgccatcgccgcgcaaaacgtccaggtctcgtccggccaactcggc
ggcttgcctgccctgcccggccagcaactgaacgccaccatcatcggcaagacccgcttg
cagaccgccgagcagttcaaggcgatcctgctcaaggtcaacccggacggctcgcaagtg
cgcgtcggcgacgtcgccgatgtgggcctgggcggtgagaactacagcgtcagcgcccag
ttcaacggcgctccagcgtcgggcctggcggtcaaactggccaacggcgcaaacgccctc
gacacagccaaggccctgcgcaagaccatcgacgacctcaagccgttcttcccgcaaggc
gtggaagtggtgttcccgtacgacaccacgccggtggtgagcgagtcgatcaagggtgtg
gttgaaaccctggtcgaagcggtcgcgctggtgttcctggtgatgttcctgttcctgcag
aatttccgcgccaccatcatcaccacgatgacggtgccggtggtgttgctgggtaccttc
gggatccttgcggcggccggcttcagcatcaacaccctgaccatgttcggcatggtgctg
gccatcggtttgctggtggacgacgccatcgtcgtggtggaaaacgtcgaacgggtgatg
agcgaagaaggcctgtcacccaaggaagccaccaagaaatccatgggccagatccagggt
gcgttggtgggtatcgcgctggtgctgtcggcggtgctgttgccgatggcgttcttcagc
ggttccaccggtgtgatctacaagcagttctccatcaccatcgtctcggccatggccctg
tcggtgctggtcgccctgatcttcaccccggccctgtgcgccaccatgctcaagcccatc
cccaagggtgagcacggcacaccgaaacgcggtttcttcggctggttcaaccgcaatttc
gaccgtggcgttcgcagctacgagcgtggcgtaggcaacatgctcaggcacaaggccccg
tacctgttggcttacgtgatcatcgtggtcggcatgatctggctgttcacccgcatcccg
acggcgttcctgccggaagaagaccagggcgtgctgtttgcccaggtgcagacaccagcc
ggttccagcgccgagcggacccaggcggtggtggacaagatgcgtgagttcctgctgcgt
ccaagcaaggacggcggcgaaggcgatgccgtcgcatcggtgttcaccgtgaccggcttc
aacttcgccggtcgtggccagagctccggcatggcgttcatcatgctcaggccgtgggag
gagcgtaacgccgacaacagcgtgttcaagcttgctggccgtgcccagcagcacttcttc
accttccgcgacgcgatggtgttcgccttcgccccgccggccgtgctggaactgggtaac
gccaccggtttcgacgtgttcctgcaggaccgtgccggtatcggccacgacaagctgatg
gaggctcgcaaccagttcctggggatggcgtcccagagcaagatcctctcccaggtgcgt
ccgaacggcttgaacgacgagccgcaataccagctcgaaatcgacgacgagaaggccagc
gcgctgggcatcaccttatcggacatcaacaacaccctgtcgattgccctgggcagtagc
tacgtgaacgacttcatcgaccgcggtcgggtgaaaaaagtgtatgtgcagggtcagccc
ggcgctcgcatgagccccgaagacctgaagaagtggtacgtgcgcaacagcgccgggacc
atggtgccgttcactgcgttcgccaagggtgaatgggtctacggctcgccgaagctggcg
cgctacaacggcgtcgaagcgatggaaatcctcggcgccccggccccgggctattccacc
ggtgaagccatggccgaagtcgaagccatcgccaagaagctgccggccggtgtcggcatt
tcctggacgggcctgtcctacgaggaacgtctgtcgggctcccaggcgccggcgttgtat
gccttgtcgctgctgatggtgttcctgtgcctggcagcgctgtatgagagctggtcgatt
ccgatcgcggtcatgctcgtggtgcccctggggatcatcggggcgctgatggcgaccagc
ctgcgcggcctgtccaacgacgtgtacttccaggtgggcttgctgacgaccatcggcctg
gcggcgaaaaacgccatcctgatcgtcgagttcgccaaggaactccacgaacagggccgg
accctgatggaagctgccatcgaagcctgtaggatgcgtctgcggccgatcatcatgacg
tccctggcgttcgtcctcggcgtggttccgctggcgatttccaccggcgccggctcgggc
agccagcacgccatcggtaccggcgtgattggcggtatgctcaccgcgaccatcctggca
atcttctgggtgcccttgttcttcgtgacggtgtcgtcgatgggtcgtcgcaagaatatc
gaccaggaccacactcctgaaacttctaaagaggctggccaatga
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