Pseudomonas cavernae: D3880_00135
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Entry
D3880_00135 CDS
T08208
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav00260
Glycine, serine and threonine metabolism
pcav00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pcav01100
Metabolic pathways
pcav01110
Biosynthesis of secondary metabolites
pcav01230
Biosynthesis of amino acids
Module
pcav_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
D3880_00135 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
D3880_00135 (trpB)
Enzymes [BR:
pcav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
D3880_00135 (trpB)
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Gene cluster
GFIT
Motif
Pfam:
PALP
PNP_UDP_1
Motif
Other DBs
NCBI-ProteinID:
AYC30888
UniProt:
A0A385YZ08
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All DBs
Position
complement(27259..28467)
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AA seq
402 aa
AA seq
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MTSFRTGPDAKGLFGHFGGQYVAETLMPLIHDLAAEYEKAKQDPEFLKELAYFQRDYVGR
PSPLYFAERLTEHCGGAKIYLKREELNHTGAHKINNCIGQILLAKRMGKKRIIAETGAGM
HGVATATVAARFGMECVIFMGTTDIDRQQANVFRMKLLGAEVIPVTAGTGTLKDAMNEAL
RDWVTNVHNTFYLIGTVAGPHPYPAMVRDFQAVIGKETREQLQAQEGRLPDSLVACIGGG
SNAMGLFHPFLDDAGVQIIGVEAAGHGIETGKHAASLNGGVPGVLHGNRTFLLQDDDGQI
IDAHSISAGLDYPGIGPEHAWLHEIGRVEYTSITDDEALAAFHQCCRLEGIIPALESSHA
LAEVFKRAPKLPKDHLMVVNLSGRGDKDMQTVMHHMQQEPKA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttttcgcaccggccctgacgccaaaggcctgttcggccacttcggcggccag
tacgtcgccgagaccctgatgccgctgatccacgacctggccgccgaatacgaaaaggcc
aagcaggatcccgagttcctcaaggaactcgcctacttccagcgcgactacgtcggccgg
ccgagcccgctgtatttcgccgaacgcctgaccgagcattgcggcggggcgaagatctac
ctcaagcgcgaagagctcaatcacaccggcgcgcacaagatcaacaactgcatcggccag
atcctcctggccaagcgcatgggcaagaagcgcatcatcgccgagaccggcgccggcatg
cacggcgtggccaccgccaccgtggccgcgcgcttcggcatggagtgcgtgatcttcatg
ggcaccaccgacatcgatcgccagcaggccaacgtgttccgcatgaagctgctcggcgcc
gaggtgatcccggtcaccgccggcaccggcaccctcaaggacgcgatgaacgaggcgctg
cgcgactgggtgaccaacgtgcacaacaccttctacctgatcggcaccgtggccggtccg
cacccctatccggcgatggtccgcgacttccaggcggtgatcggcaaggaaacccgcgag
cagctgcaggcccaggaaggccgcctgccggacagcctggtcgcctgcatcggcggtggc
tccaacgccatgggcctgttccaccccttcctcgacgacgccggcgtgcagatcatcggc
gtcgaagcggccggccacggcatcgagaccggcaagcacgcggccagcctgaatggcggc
gtgcccggcgtactgcacggcaaccgcaccttcctgctgcaggacgacgacggccagatc
atcgacgcccactcgatttccgccggcctcgactaccccggcatcggcccggaacacgct
tggctgcacgagatcggccgggtcgaatacacgtcgatcaccgatgacgaggcgcttgcc
gccttccaccagtgctgccgcctggaaggcatcatcccggcgctggagtcgtcccacgcg
ctggccgaagtgttcaaacgcgcgccgaagctgccgaaggaccacctgatggtggtgaac
ctgtccggccgtggcgacaaggacatgcagaccgtgatgcaccacatgcaacaggagccc
aaagcatga
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