Pseudomonas cavernae: D3880_10400
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Entry
D3880_10400 CDS
T08208
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pcav
Pseudomonas cavernae
Pathway
pcav01501
beta-Lactam resistance
pcav01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3880_10400
01503 Cationic antimicrobial peptide (CAMP) resistance
D3880_10400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcav02000
]
D3880_10400
01504 Antimicrobial resistance genes [BR:
pcav01504
]
D3880_10400
Transporters [BR:
pcav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D3880_10400
Antimicrobial resistance genes [BR:
pcav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D3880_10400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Patched
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AYC32770
UniProt:
A0A385Z2Q2
LinkDB
All DBs
Position
complement(2265076..2268216)
Genome browser
AA seq
1046 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLVGTLSILKLPINQYPSIAAPAIGIQVSYPGASAQTVQDT
VVQVIEQQLNGIDKLRYISSESNADGSMTITATFDQGTNPDIAQVQVQNKLQLATPLLPQ
EVQQQGIRVTKAVKNFLMVIGLVSEDGSMDKNDLSNYIVANIQDPLSRTPGVGDFQVFGA
QYAMRIWLDPAKLNNFKLTPIDVKTAIQAQNVQVSSGQLGGLPALPGQQLNATIIGKTRL
QSAEQFSDILIKVNRDGSQVRLRDVAKVELGGENYNIGAQFNGNAASGIAIKLATGANAL
DTAKAIRATLSQLEPFFPAGMKVVYPYDTTPVVSASIDEVVKTLAEAIVLVFLVMYLFLQ
NFRATLIPTLAVPVVLLGTFGVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
AEEGLSPLEATRKSMGQIQGALVGIALVLSAVLLPMAFFSGSTGVIYRQFSITIVSAMAL
SVLVALIFTPALCATLLKPIKKGEHHAPKQGFFGWFNRNFDRSVQSYERGVTGMLKHKAP
YLLAYLVILVGMVWLFTRIPTAFLPDEDQGVLFAQVQTPSGSSAERTQAVVDQMREYLLT
EEKDTVSSVFTVTGFNFAGRGQSSGMGFIMLKPWDERPGEEHSVFSLAERAQEHFSKFID
AKVSAFAPPAVMELGNASGFDLYLQDRAGVGHEALVAARNQFLELAGKSPVLTRVRPNGL
NDEPQYQLIIDDERARALGLSLADINDTLSIAWGASYVNDFIDHGRVKKVYLQGEAQARM
SPEDLKKWFVRNDQNEMVPFSAFAGGQWSYGSPKLSRYNGVSAMEVLGQAAPGYSSGEAM
AAVEEIAKQLPVGIGYSWTGLSYEERLAGSQALALYALSLLVVFLCLAALYESWSIPFSV
MLVVPLGVIGALLATYMRDLSNDVFFQVGLLTTIGLSAKNAILIVEFAKDLHAQGKSITD
AAIEACRMRLRPIIMTSLAFVLGVLPLAISTGAGSGSQHAIGTGVIGGMLTATVLAIFGV
PLFFVMVTSLFQRKPKPAETWQEVAK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagttcttcatcgaccgcccgattttcgcctgggtgatcgccttggtgatcatg
ctggtcggtaccctgtcgatcctcaagctgccgatcaaccagtacccgagcatcgccgcg
cccgccatcggcatccaggtcagctaccccggcgcctcggcgcagacggtgcaggacact
gtggtgcaggtcatcgagcagcagctcaatggtatcgacaagctgcgctacatctcctcg
gaaagtaacgccgatggcagcatgaccattaccgccaccttcgatcagggcaccaatccg
gacatcgcccaggtgcaggtgcaaaataaattgcaactggcgaccccgctgctgccgcag
gaagtccagcagcaaggcattcgcgtgaccaaggcagtgaagaacttcctgatggtcata
ggcctggtgtccgaagacggcagcatggacaagaacgacctgtccaactacatcgtcgcc
aacattcaagacccgctttcgcggactccgggcgtcggcgacttccaggtgtttggcgcg
cagtacgccatgcgtatctggctggacccagccaagctgaacaacttcaagctgaccccg
atcgacgtgaaaactgccattcaggcgcagaacgtccaggtttcctccggccaactcggt
ggcttgccggcactgccaggtcagcagctgaatgccaccatcatcggcaagacccgtctg
cagagtgccgagcagttctccgacatcctgatcaaggtcaaccgggacggctcgcaagtc
cgcctgcgtgatgtcgccaaggtcgagttgggtggcgaaaactacaacatcggcgcgcaa
ttcaacggtaacgccgcctccggcatcgccatcaaactggccaccggcgccaacgcgctg
gataccgcaaaagccatccgcgccaccctgtcgcagctggaaccgttcttcccggcgggc
atgaaggtggtctacccctacgacactacaccggtggtctcggcctcgatcgacgaggtg
gtgaagaccctcgccgaggcgattgtcctggtgttcctggtgatgtacctgttcctgcag
aacttccgcgccacgctgatcccaaccctggcggtgccggtggtactgctcggcaccttc
ggcgtgctggcggcgttcggcttcagcatcaacaccctgacgatgttcggcatggtgctg
gccatcggcttgctggtggacgacgccatcgtggtggtcgagaacgtcgagcgggtgatg
gccgaggaagggctttcaccgctggaggcgacgcgcaaatcgatgggtcagattcagggc
gccttggtcggtatcgccctggtactctccgccgtactgttgccaatggccttcttcagc
ggctccacgggggtgatctaccggcagttctcgatcaccatcgtgtcagccatggcgctg
tcggtgctggtagcgctgatcttcacccccgcactgtgcgccaccctgctaaaaccgatc
aaaaagggcgaacaccacgcaccgaagcagggtttctttggctggtttaaccgcaacttc
gatcgcagcgtgcaaagctatgagcgcggcgtcaccggcatgctcaaacataaagcgccg
tacctgctcgcctatctggtgatcctggtcggcatggtctggctgttcacccgcatccca
accgccttcctccccgatgaagaccagggcgtgctgttcgctcaggtgcagaccccaagc
ggttccagcgccgagcgtacccaggcggtggtcgaccagatgcgcgaatacctgctaacc
gaggaaaaggacacggtcagctcggtgttcaccgtaaccggcttcaacttcgccggtcgc
ggccagagctcgggcatgggattcatcatgctcaagccctgggacgaacgcccaggcgaa
gaacacagcgtgttcagcctggccgaacgtgcccaggagcacttcagcaagttcatcgac
gccaaggtgtccgccttcgccccgcccgcggtaatggaactgggtaacgccagcggcttc
gacctgtacttgcaggatcgtgccggcgtcggtcatgaggcgctggtcgcagcacgtaac
cagttcctcgaactcgccggcaagagtcccgtactcactcgcgttcggcctaatgggctg
aacgacgaaccgcaataccagctgatcatcgacgatgagcgtgcgcgcgcgcttggcctg
tcactggcagacatcaacgacaccctgtcgattgcctggggcgccagctacgtcaacgac
ttcatcgaccacgggcgggtgaagaaggtctacctgcaaggcgaagcccaggcacgcatg
agccccgaggacttgaagaagtggttcgtgcgtaacgaccagaacgagatggtgccgttc
tccgccttcgccggcggccagtggagctacggctcgccgaagctgtcgcgctataacggc
gtatcggccatggaagtgctgggccaagcggctccgggctacagctccggcgaagccatg
gccgcggtggaagagatcgccaagcagctgcccgtcgggatcggctattcctggaccggt
ctgtcctacgaggaacgcctcgccggcagtcaggcgctggcgctctatgcgctgtcgctg
ctggtggtgttcctctgcctggcggcgctctatgagagctggtcgatccccttctcggtg
atgctggtggtgccgctgggggtgatcggcgcgctgctcgccacctacatgcgcgacctc
tccaacgacgtgttcttccaggtcggcctgctgaccaccatcggcctgtcggcgaagaac
gccattttgatcgtcgagttcgccaaggacctgcacgcccaaggcaagagcatcaccgat
gccgccatcgaggcctgccgcatgcgcttgcggcctatcatcatgacctcgctggcgttc
gtcctcggcgtactaccgctggccatctccaccggcgccggttcgggcagccagcatgcc
atcggcaccggggtgatcggcggcatgctcaccgccacggtgctggcgatcttcggcgtg
ccgctgttcttcgtcatggtgacgtcgctgttccaacgcaaacccaagcctgccgagacc
tggcaggaggtggccaaatga
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integrated database retrieval system
