Pseudomonas carboxydohydrogena: AFIC_001866
Help
Entry
AFIC_001866 CDS
T08963
Name
(GenBank) efflux RND transporter permease subunit
Organism
pcax
Pseudomonas carboxydohydrogena
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
WEF50330
LinkDB
All DBs
Position
complement(1929236..1932403)
Genome browser
AA seq
1055 aa
AA seq
DB search
MNLGRLSINQPILAMVLSIVLLIVGAIAYTTLPVAEYPQVAPPTVVVTTQYPGASAQTVS
DTVATPIEQQINGVEDMLYMYSQATSDGQLKITITFKLGTDLDKAQVLVQNRVAIAQPQL
PEEVQRNGVVTRKNSPDLLMVVFMLSPNDAYDQLYISNYALRQVRDQLLRLDGIGDIQIF
GARDYSMRLWLDPDKIANLGMTAGDVLKAIRAQNLQIAGGILGEPPISDRAFQESLTFTG
RLKDASQFEDIVIKAGADGRTVRLRDVARIELGALSYTTNSFLLRKSAVALLVSQRPGSN
ALATSKNISNEMERLKADFPPGLEYNIGYNPTEFIAQSVNELIKTIYEAMVLVVIVVLVF
LQGWRPAIIPIIAIPVSLVGTFAVMAALGFSVNNLTLFGLVLAVGIVVDDAIVVVENVER
HLGAGMTRRDAALLTMQEVGGALVSIALVLCAVFVPTAFLGGISGQFFQQFAVTIAVATA
ISCFCSLTLSPALASLILESHHEKKPPARWNIVARWWGRFTAYFNRGFDWLSNNYAVTAE
YVIRHSAAMLAVYAVLIGSAGWLLVSTSKGFIPAQDRGYVIISVQLPGAASLARTTAVVR
QIENIALGVPGVVRVPAFAGLSGATRTQASNAAALFPVFDEPEERAHKGLTAQVITDELR
KRLAKIENAFVIVVPPPAVPGIGTGGGFAMRVQDREGRGAELLSAATTELVAAARKAPGL
TAVFSPFTADTPQVFVDIDRQKAQMLSVPIQNVTEAIETYFGSTYVNDFNILGRTYHVTA
QADLPFRRETTDLARVKTRNAAGDMVLLGSVVNFRNISGPDRVARYNLYPTAELQGDTLP
GTSSATAIEEMKKLASDILPSGFSYEWTDLSYQQVTAANAGLYVFPVCVLFVFLVLAAQY
GSWTLPLSVILIVPMCLLAATIGVRLMGQDINILTQIGFVVLVGLAAKNAILIVEFARDI
EHEGKDTLHAVIEACRLRLRPILMTSFAFILGVLPLVISTGSGSEMRQAVGVAVFFGMLG
VTLFGLLFTPIFYMLIRRMFPSSVVVPSRDAGANI
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcggccgtctttccatcaatcagcccatcctcgcgatggtgctgtcgattgtg
ctgctgatcgtcggcgcgattgcctataccacgctgcctgtcgctgagtatccgcaggtc
gcgccgccgacggttgtcgtcaccacgcaatatccgggcgcgtcggcgcagacggtgtcc
gacacggtcgcgacgccgatcgagcagcagatcaacggcgtcgaggacatgctgtacatg
tacagccaggcgacctccgacggccagttgaagatcaccatcaccttcaagctcggcacc
gatctcgacaaggcgcaggtgctggtgcagaaccgcgtcgcgatcgcgcagccgcaactg
cctgaggaggtgcagcgcaacggcgtcgtcacccgcaagaacagtcccgacctgttgatg
gtcgtgttcatgctgtcgccgaacgacgcctacgaccagctttatatttcaaactatgcg
ttgcggcaggtgcgcgatcagttgctgcggctcgacggcatcggcgacatccagattttc
ggcgcgcgcgactattcgatgcggctgtggctcgacccggacaagatcgccaacctcggc
atgacggcgggcgacgtgctcaaggcgatccgtgcgcagaacctgcaaattgcgggcggc
attctcggcgagcccccgatttcggatagggcctttcaggaaagcctgacctttaccggc
cgcctgaaggatgcatcgcaattcgaggacatcgtcatcaaggcaggcgcggacgggcgc
accgtgcggctgcgcgacgtggcgcggatcgaactcggagcgctgtcctataccaccaac
agcttcctgctgcgcaagtcggcggtcgcgcttctggtctcgcagcggccggggtcgaac
gcgctggcaacctcgaaaaacatctcgaacgagatggagaggctgaaggccgatttcccg
cccgggcttgaatacaatatcggctacaatccgaccgaattcatcgcgcagtcggtgaac
gaactcatcaagacgatctatgaggcgatggtcctcgtcgtcatcgtcgtactggtgttc
ctgcaaggatggcggccggcgatcatcccgatcattgcgattccggtgtcgctggtcggc
accttcgcggtgatggccgcgctcggattctcggtcaacaacctgacgctgttcggcctg
gtgctggcggtcggcatcgtggtggacgacgccatcgtcgtcgtcgaaaatgtcgagcgc
catctcggtgcgggcatgacgcggcgggacgcggcgcttctgacgatgcaggaggtcggc
ggcgcgcttgtttccatcgcgctggtgctgtgcgcggtgttcgtgccgacggcgtttctc
ggcggcatttcagggcagttcttccagcaattcgcggtgacgattgcggtcgcgaccgcg
atctcgtgcttctgctcgctgacgctgtcgcccgcgctggcctcgctcatccttgaatcg
catcacgagaagaagccgcccgccagatggaacatcgtcgcgcggtggtggggacgcttc
acggcctatttcaatcgcgggttcgactggctgtcgaacaattatgccgtcaccgccgag
tacgtcattcgccattcggcggcgatgctggcggtctatgcggtgctgatcggctccgcc
gggtggcttctggtgagcacgtcgaagggattcattccggcgcaggatcgcggctacgtc
atcatctcggtgcagttgccgggtgccgcgtcgctggcgcggaccacggcggtcgtgcgt
cagatcgagaacattgcgctcggcgttccgggcgtggtgcgcgtcccggcgttcgcgggc
ctgtcgggtgcgacgcgcacacaggcgagcaacgcggcggcgctgtttcccgtgttcgac
gaaccggaggagcgggcccataaggggctgaccgcgcaggtgattaccgacgaattgcgc
aagcggctcgcgaagatcgagaacgcctttgtgatcgtggtgccgcctccggccgtgccg
ggcatcggcaccggcggcggtttcgccatgcgcgtgcaggatcgcgaagggcgtggcgcg
gaattgctctccgcggcgacgacggaactggtcgccgcggccagaaaggcgccgggcctg
acggcggtgttctcgccgttcaccgccgacacgccgcaggtgtttgtcgatatcgaccgg
cagaaagcgcaaatgctcagcgtgccgatccagaacgtgacggaagcgatcgagacctat
ttcggctcgacctacgtcaacgacttcaacattctgggccgcacctatcacgtcaccgcg
caggctgacctgccgttccgcagggaaacgaccgatcttgcgcgcgtcaagacgcgcaat
gcggccggcgacatggtgctgctgggcagcgtggtcaacttccgcaatatctcgggcccg
gatcgcgtagcgcgctacaatctgtatccgacggcggagttgcagggcgacacgctcccc
ggcaccagttcggccacggccatcgaggagatgaagaaactcgcatcggatattctgccg
agcggattttcctatgagtggaccgacctgtcgtaccagcaggtgacggcggcgaacgcg
ggactttatgtattcccggtctgcgtgctgttcgtgttcctggtgctcgccgcgcaatac
ggaagctggacgctgccgctgtcggtgatcctgatcgtgccgatgtgcctgctcgccgcc
accatcggcgtgcggctgatggggcaggacatcaacatcctcacccagatcggtttcgtc
gtgctggtcggcctcgccgcgaagaacgcgatcctgatcgtggaattcgcgcgcgacatc
gagcacgagggcaaggacacgctgcatgcggtgatcgaggcgtgccggttgcgtctgcgg
ccgatcctgatgacctcgttcgccttcatcctcggcgtgctgccgctggtgatctcgacc
ggctccggctcggagatgcgtcaggcggtcggcgtcgcggtgttcttcggaatgctgggc
gtcacgctgttcgggctgctgttcacgccgatcttctacatgctgatccgcaggatgttc
ccgagttcggtcgtggtgccgagccgcgatgccggggcgaacatctga
DBGET
integrated database retrieval system
