Pseudomonas carboxydohydrogena: AFIC_002488
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Entry
AFIC_002488 CDS
T08963
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFIC_002488
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcax02000
]
AFIC_002488
Transporters [BR:
pcax02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AFIC_002488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
AAA
AAA_16
SMC_N
RsgA_GTPase
Mg_chelatase
AAA_22
Rad17
AAA_28
AAA_29
AAA_23
AAA_30
AAA_5
TOBE_3
AAA_19
NACHT
SRP54
AAA_25
NB-ARC
AAA_24
ATPase_2
Zeta_toxin
AAA_14
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
WEF50931
LinkDB
All DBs
Position
complement(2580977..2582080)
Genome browser
AA seq
367 aa
AA seq
DB search
MHAHLDVRHLRKSYGTFTALDGVSFTAAPGEIVALLGPSGCGKTTLLNLIAGFLTPDAGS
VIVGGRDIVNVAPHKRDMAMVFQNYALFPHMSVERNVAFGLKMRSVASGEVAKRVQEALD
LVQLGDLGKRYPKELSGGQQQRVALARALVVRPSVLLLDEPLSNLDALLRKRMREEMRQI
LKAANITTVVVTHDQEEALVSADSIVLLASGRVEQRSTPNELYERPSTIFSARFMDVTNF
LDGTVIGHEQGHAVIDTAFGKLRAEVDSCTIGAKVTVAVRPENIAKGEEAGENCVTGEVI
SSSYHGPVRRVEIEANGARLIADIPVKRCLSKVGDTMSVSWPADDTRLLPGQGHAVPDGK
NLEDLLQ
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgcacctcgacgtccgccatttgcgaaagtcctacgggactttcacggcgctc
gatggcgtgtcgtttacggcggcacccggagagatcgtggctctgctcggtccatccggt
tgcggcaagacgacgctccttaacctcatcgcggggtttctgacccccgatgcaggctcc
gtcatcgttggtggacgtgacatcgtcaacgtggccccgcacaagcgggacatggcgatg
gtgttccagaattatgcgttgtttccgcacatgagcgtcgaacgcaacgtcgcgtttggc
ctcaagatgcggagcgtcgcatccggcgaggtggccaagcgcgtgcaggaagcgctcgat
ctcgtgcaactcggcgatctcggcaagcgttatccgaaggagctgtcgggcgggcaacag
caacgcgttgcactcgcgcgcgcgctggtggtccgtccgtccgttcttctgctggacgag
ccattgtcgaatctcgacgcgctgctgcgcaagcggatgcgtgaggaaatgcggcagatc
ctcaaggcggcgaatatcacgaccgtcgttgtgacgcacgatcaggaagaggcgctggtg
tctgccgacagcatcgttctgctggcgtcggggcgggtcgaacagcgatcgacgccgaat
gaattgtatgagcggcccagcaccatcttcagcgcccgtttcatggacgtgaccaatttc
ctcgacggcaccgtgatcggccatgaacagggccatgcggtgatcgataccgcctttggc
aagctgcgggctgaggtcgatagctgcacaattggcgcaaaggtgacggtggctgtgcgg
cccgagaacatcgccaagggcgaggaggcgggcgaaaactgtgtcaccggagaggtgatt
tccagcagctatcacgggccggtgcggcgggtggagatcgaggccaatggcgcccggttg
attgccgatattccggtgaagcgctgcctgagcaaggtcggagacacgatgtccgtgtca
tggcctgccgatgatacacggttgctgccggggcaagggcatgctgtgcccgacggcaag
aatctcgaggatctgctgcaatga
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