Pseudomonas carboxydohydrogena: AFIC_002627
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Entry
AFIC_002627 CDS
T08963
Name
(GenBank) ribulose bisphosphate carboxylase small subunit
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax00630
Glyoxylate and dicarboxylate metabolism
pcax00710
Carbon fixation in photosynthetic organisms
pcax01100
Metabolic pathways
pcax01110
Biosynthesis of secondary metabolites
pcax01120
Microbial metabolism in diverse environments
pcax01200
Carbon metabolism
Module
pcax_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AFIC_002627
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
AFIC_002627
Enzymes [BR:
pcax01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
AFIC_002627
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_small
Motif
Other DBs
NCBI-ProteinID:
WEF51063
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All DBs
Position
complement(2719532..2719951)
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AA seq
139 aa
AA seq
DB search
MRITQGCFSFLPDLTDDQIKSQVQYCLEKGWAVNIEFTDDPHPRNTYWEMWGLPMFDLRD
AAGIMKELADCRRVYGDRYIRVCGFDSSHGWESVRISFIVNRPAEEPGFGLQRQEAQGRN
MRYSTYSYAANRPEGARYS
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcactcaaggttgtttttcgtttcttcctgatctgaccgacgaccagatcaag
agccaggttcagtattgcctcgagaagggctgggcggtgaacatcgagttcaccgacgac
ccgcacccccgcaacacctattgggaaatgtggggactgccgatgttcgacctgcgcgat
gccgccggcatcatgaaggagctcgccgattgccgccgcgtctatggcgatcgctacatc
cgcgtctgcggattcgattccagccacggctgggagtcggtgcggatttccttcatcgtc
aaccgcccggcggaggagcccggtttcggcttgcagcggcaggaggcacaggggcgcaac
atgcgttactcgacctactcctacgcggcgaaccgtccggaaggcgcgcgttactcgtga
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