Pseudomonas carboxydohydrogena: AFIC_003152
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Entry
AFIC_003152 CDS
T08963
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax00521
Streptomycin biosynthesis
pcax00523
Polyketide sugar unit biosynthesis
pcax00541
O-Antigen nucleotide sugar biosynthesis
pcax01100
Metabolic pathways
pcax01110
Biosynthesis of secondary metabolites
pcax01250
Biosynthesis of nucleotide sugars
Module
pcax_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
AFIC_003152 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AFIC_003152 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AFIC_003152 (rfbC)
Enzymes [BR:
pcax01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
AFIC_003152 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
WEF51557
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Position
3261020..3261562
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AA seq
180 aa
AA seq
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MKVTATALDGVMVVEPSLFSDARGYFFESFNHQRFRESVADVPFVQDNQSFSKKGVVRGL
HYQIAPKAQGKLVRVLAGEIFDVVVDIRRNSPRFGQWTGIVLSADNKKQLWIPEGFAHGF
QVLSETAEVIYKTTDYWSAEHERAIRWNDPAVGIDWPLKINPIISGKDNDAPLLSAATLV
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggcgaccgcgctggacggcgtcatggtggttgaaccatcccttttttcc
gacgcccgcggatatttcttcgagagtttcaatcatcagcgttttcgcgaatctgtcgcg
gatgtgccattcgttcaggacaatcagtcgttctcgaaaaaaggtgtcgtgcgcggcctg
cattaccagatcgcgccgaaggcgcagggcaagctggtgcgggtgcttgcaggagagatt
ttcgatgtcgtcgtcgacatccggcgcaattcgccccggttcggacaatggaccggaatc
gttctcagcgcggataacaaaaagcagctctggattccggagggcttcgcccacggcttt
caggttctgagcgagacggccgaagtcatttacaaaacgacggactactggtccgccgag
cacgaacgcgcgatccgctggaacgatccggccgtcggcatcgattggccgctgaaaata
aacccgatcatttccggcaaggacaatgacgcgcccctcctgagcgcggcaacccttgta
taa
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