Persicimonas caeni: FRD00_12210
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Entry
FRD00_12210 CDS
T06769
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pcay
Persicimonas caeni
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcay03016
]
FRD00_12210 (mnmE)
Transfer RNA biogenesis [BR:
pcay03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
FRD00_12210 (mnmE)
Prokaryotic type
Methyltransferases
FRD00_12210 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
GTP_EFTU
Arf
RsgA_GTPase
Dynamin_N
Ras
ABC_tran
AAA_28
AAA_16
AIG1
cobW
AAA_18
GCV_T
DUF919
AAA_29
MCM
Guanylate_kin
SRPRB
Roc
Motif
Other DBs
NCBI-ProteinID:
QED32703
LinkDB
All DBs
Position
complement(3298104..3299486)
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AA seq
460 aa
AA seq
DB search
MIDSTTIAAIATPAGRGGVGIVRVSGPEARDVLRALVPAWPDDHPSHKLRLSRIHDEHGD
LVDEALCVLMESPHTYTGDDVVEFQCHGGPIILRRVLDAALASGARAAGPGEFTERAFLN
GRIDLTQAEAVADLVEATSVSAHKLAMEHLQGSLGAAIRELRTLTMEAVTLVESAIDFAH
EEHVYQIEHDEVLQRVDKVIAELRDLKRRFDQGRRQREGVRVVILGPPNAGKSTLFNALH
GSERAIVTSIAGTTRDFLEEEIHLEGVALRVVDTAGLRDATDEVEQIGIERSRELQSKAD
LVIWLVDQEQGLDDDQRRDLEETLARHIETVVVRNKIDLPSTLTADDVALLERFEHVVPT
ALAADGEREGMDELVGVLTGIAAELTSGEGVLLSRTRHLECVNRALEALGRAKEAVEAGM
EHEFVALDLREGLDALGDIVGQVSTDDILNKIFSEFCVGK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatcgactcaacgaccatcgctgcgatcgccactccggccggccggggtggcgtgggc
atcgtccgcgtcagcgggcccgaggcgcgcgatgtgctccgagcgttggtgcctgcctgg
cccgacgatcacccctcccacaaattgcgcctgtcgcgcatccacgacgaacacggagac
ctggtcgacgaggccttgtgcgtgctcatggagagcccgcatacctacaccggcgacgac
gtcgtcgagttccagtgccacggcggcccgatcatcttgcgccgcgtgctcgacgcggcc
ctggcgagcggcgcgcgcgcggccggcccgggcgagttcaccgagcgggcgtttttgaac
ggacgcatcgacctcacccaagccgaagccgtcgccgacctggtcgaggcgaccagcgtc
tcggcgcacaagctcgccatggagcacctgcaggggagtttgggcgcggccatccgtgaa
cttcgcacgctcaccatggaagcagtgacgctggtcgagtcggccatcgacttcgcccat
gaggagcacgtctaccagatcgagcacgacgaggtgctccaacgcgtcgacaaagtgatc
gccgagcttcgcgacctgaagcgccgcttcgaccagggccgccgccagcgagaaggcgtg
cgcgtggtcatcttgggcccgcccaacgccggcaagtcgacgcttttcaacgcgctgcac
ggctcggagcgagcgatcgtgacctcgatcgccggcaccacccgcgactttttggaagaa
gagatccacctcgagggcgtcgccctgcgcgtggtcgacaccgccggtttgcgcgacgcg
accgacgaggtcgagcagatcggcatcgagcgaagccgcgagctgcagagcaaggccgac
ctggtcatctggctcgtcgaccaagagcaaggcctcgacgacgatcaacgccgcgacctc
gaagagacactcgcccgccatatcgaaacggtggtcgtgcgcaacaagatcgacttgccg
tcgacgctcaccgccgacgacgtggcgctgctggagcgcttcgagcacgtcgtgccgacg
gccttggccgccgacggcgagcgcgagggcatggacgagctggtcggcgttcttaccggc
attgccgccgagctcacctccggcgagggcgtcctgctcagccgcacgcggcacttagag
tgcgtcaaccgggcactggaagcgctcgggcgcgccaaagaggccgttgaagcgggcatg
gagcacgaattcgtcgcgctcgacctgcgcgagggcctggacgctctgggcgacatcgtc
ggccaggtgtcgacggacgatatcctgaacaagatcttctcggagttttgcgtcggcaag
tag
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