Plasmodium chabaudi: PCHAS_0826800
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Entry
PCHAS_0826800 CDS
T01108
Name
(RefSeq) histone deacetylase 1, putative
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03082
ATP-dependent chromatin remodeling
pcb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PCHAS_0826800
03083 Polycomb repressive complex
PCHAS_0826800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcb03036
]
PCHAS_0826800
Enzymes [BR:
pcb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
PCHAS_0826800
Chromosome and associated proteins [BR:
pcb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
PCHAS_0826800
HDAC complexes
Sin3A-HDAC complex
PCHAS_0826800
BRAF-HDAC complex
PCHAS_0826800
REST complex
PCHAS_0826800
SHIP complex
PCHAS_0826800
MiDAC complex
PCHAS_0826800
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
PCHAS_0826800
Heterochromatin formation proteins
Other heterochromatin formation proteins
PCHAS_0826800
Chromatin remodeling factors
NuRD complex
PCHAS_0826800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
3498428
NCBI-ProteinID:
XP_745306
UniProt:
A0A077TKP3
LinkDB
All DBs
Position
8:complement(1036627..1037970)
Genome browser
AA seq
447 aa
AA seq
DB search
MSNRKKVAYFHDPDIGSYYYGAGHPMKPQRIRMTHSLIVSYNLYKYMEVYRPHKSDVNEL
TLFHDYEYIDFLSSISMENYRDFTYQLKRFNVGEATDCPVFDGLFQFQQSCAGASIDGAA
KLNHHCADICVNWSGGLHHAKMSEASGFCYINDIVLGILELLKYHARVMYIDIDVHHGDG
VEEAFYVTHRVMTVSFHKFGDYFPGTGDITDVGVNHGKYYSVNVPLNDGITDEAFVDLFK
VVIDKCVQSYKPGAIILQCGADSLTGDRLGRFNLTIKGHARCVEHVRSYNLPLLVLGGGG
YTIRNVSRCWAYETGVVLNKHHEMSDQISLNDYYDYYAPDFQLHLQPSSIPNYNSPEHLS
KIKMKIAENLRNIEHAPGVQFSYVPPDFFDSDIDDKSDKNQYELKDDSGGGRAAGTRGKE
HSSSHHLRRKNYEDDFFDMSDRDQGII
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataggaaaaaagtagcatatttccatgaccctgatataggtagctattattat
ggagcgggtcatcctatgaagcctcaaagaattcgaatgacacattcgttaattgtatca
tacaatttatataaatatatggaagtatataggcctcataaaagtgatgtgaatgagtta
actttatttcatgattatgaatatattgattttttatcatcaatatctatggaaaattat
cgagatttcacataccaattaaaaagatttaatgttggagaagctactgattgcccagtt
tttgatggcctttttcaatttcagcaatcctgcgcaggtgcatcgattgatggcgcagcg
aaattaaatcaccattgtgccgatatttgcgtgaactggtcaggtggtttacatcatgca
aaaatgtcagaagctagtggtttttgttatattaatgacattgttttaggaatattagaa
cttttaaaatatcatgcacgtgtcatgtatattgacatcgatgttcatcatggggatgga
gttgaagaagctttttatgttactcatagagttatgactgtatcatttcataaatttggt
gactactttcctggtacaggtgatataacagatgttggagttaatcatggaaagtactat
agtgttaatgtgccattaaatgatggaataacagatgaagcatttgtggatttatttaaa
gttgttatagataaatgtgtccagtcttataagcctggtgctattatacttcaatgtgga
gccgatagtttaacgggtgatagattaggcagatttaatttaacgataaaaggtcatgca
agatgtgttgagcatgttcgttcatataatttgccattattagttttaggtggtggagga
tatacaatacgtaatgtatcaagatgttgggcatatgaaactggagttgttttaaataaa
catcatgaaatgtctgatcaaattagcttaaatgattattatgattattatgcacctgat
tttcaattacatttacagccatctagtataccaaattataattcacctgaacatttaagt
aaaattaaaatgaaaatagcagaaaacttaaggaatattgagcatgctccaggtgtccaa
ttttcttatgtaccacctgactttttcgattcagatatagacgataaaagtgataaaaat
cagtacgaacttaaagatgatagtggaggtggtagagcagcaggaacaagaggaaaagaa
cattcatcgagccatcatctaaggcgaaaaaattatgaagatgatttcttcgatatgtca
gatagagatcaaggaattatttag
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