Mixta calida: C2E16_01410
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Entry
C2E16_01410 CDS
T05419
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
pcd
Mixta calida
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Pertactin
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
AUY23695
LinkDB
All DBs
Position
316351..319314
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AA seq
987 aa
AA seq
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MENRNATIPLLYRLNPLSAFIQRRLAFTGALSLPLMLFTPFIVQATEYGSITVGKEATLQ
LSPGDSVTVAGSEKHLCGICNAAGASDSTLTLGDSVTINVDGPMARGIRLQGNNAQLQAN
QLRITANGINGIEADARNVSLNLGHASRIELTTNLGWGNGIALSRASTLEADALSIITHD
LATGLYIYHAGSQADLGNNSYIQTNGNQASGIFISGMEYNGLNTPASLKANQLYIETAGN
AAPGINIQPNSVVDLGKQSIITTQGEAAIGIWTLGELTAEALEVRTAGGELANAIRVNGQ
GVANIGPGSALYTEKSGALVAMGSTAAIYFNGSPTQRNTIVSGGTYAVSAQFAGANVNLS
YADIHAISDTDGTIALWAFGGGNIMGDNLSIVGNTATTGAYAMSDSEIALTGKTVIRMAS
PLEIALGTEGSEEAGAGRITLNGQADIVGSVRATGGAIALDMASGSQLTGVAFSDSANGA
ILDMKMDQSRWSMVADSVVDSLTLNDSTVDFANDVVGTRLTVGELAGSGTFAMKTDIVAL
NSDKLVVTGSSAGNHTLLVRNRGDMRTTGQEVLTLVETPDGQANFALSPDRGRVELGGYL
YDLRKAGGDWQLYAAGAVDDPAGADPEPTPEPTPEPTPEPTPEPTPEPTPEPTPEPTPEP
TPEPTPTPTPTPTPTPITPPDRPDITNAADAGANFLNISYLMNYAEMQSLLQRFGDLRQK
QSLGDGWVRGIGGRFDSFASGKLSDFSLSYSGMQFGVDRQLRPDLPVVAGAFMGVTHGNA
HYASGSGDQTSSHAGFYLTAMTDSGLWFDGVVKYSRMKSGFNVRDSQGQGVSGYGAANNY
NLSLESGKRFALTQAEQGFYLEPQLQLAWSHQQGDTLRASNGLRIDLDGYDSLLGRASAL
LGYQITQEARQLNLYLKSGVVREFKGDTGYRLNGSPERHSFRGNGWNNGLGVSTQVAGQH
LFYLEGDSTTGHQFNQRQFSAGYRFTF
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcgcaacgccaccataccgcttctgtaccggcttaatccgctcagtgcgttt
attcaacgcagacttgcctttaccggcgccttgtcgctcccgttgatgttatttacgcct
tttatcgttcaggccacagagtatggctcaattaccgttggaaaagaggcgacgctgcaa
ctgtctcccggagacagcgtgacggtagcgggcagcgaaaagcacctttgcggcatctgc
aacgctgctggtgccagcgacagcacgctgacattgggcgatagcgtgacgattaatgta
gatggaccgatggcaagaggcatcaggctgcaaggcaataatgcgcagttgcaggcgaac
cagctgagaataacggcgaacgggatcaatggcattgaagcggatgcgcgcaatgtgtcg
ctgaatttaggccatgcaagccgcattgaattaaccaccaatttaggatggggaaatggc
attgctcttagtcgcgcttcgacgctggaagccgatgcgttatcgattattacgcacgac
ttagcgacggggttatacatttaccatgctggctcgcaggctgatttaggaaataacagc
tatattcagacgaatggcaatcaggccagcggcatattcatttccggcatggaatataac
ggactaaatacgccagccagcctgaaggcgaatcaactctatattgagaccgccgggaac
gctgccccgggtattaatattcaacctaactccgttgtcgatttaggaaaacagagcatt
ataacaacccagggcgaggcggctattggtatctggacgctgggcgagttgacggcagag
gcgctggaggtccgcaccgcaggcggcgaactcgccaatgcaatcagggtgaatgggcag
ggcgtggcgaacattggccctggcagcgctctctatacggaaaaaagcggcgcgctggtc
gccatgggcagcaccgccgccatttacttcaacggcagcccgacgcagcgtaacacgatt
gtttccggcggcacctatgcggtatcagcgcagtttgcaggcgccaacgtcaatctctct
tatgccgatattcacgccatcagtgatactgacggcaccatcgcgctttgggcatttggc
ggcggtaatattatgggcgataacctttccatcgttggtaataccgccacaacgggcgct
tatgccatgtctgacagtgaaatcgcgcttaccggcaagacggtgattcgtatggcttcg
ccgctggaaatagcgctgggcacagagggaagcgaggaggctggcgccggtcgcattacc
ttaaatggacaggcggatattgtcggcagcgtacgggcgacaggcggcgccattgcgctg
gatatggcgtcaggttcacagcttaccggcgttgccttcagcgacagcgccaacggcgcc
atactggatatgaagatggatcagagccgctggagcatggtggccgactccgtggtagat
agcctgacgctgaacgacagtacggtcgacttcgcaaatgacgtggtcggcacgcggctg
acggtcggggaactggcaggcagcggtacttttgcgatgaaaacggatatcgtcgcgctg
aacagcgataagctggtggttaccggcagcagcgcgggcaatcatacgctgctggtgcgc
aatcggggcgatatgcgcactaccgggcaagaggtgctgacgctggtggaaaccccggat
ggtcaggcgaatttcgctttatcgccggacaggggcagggtggaactgggcggttatctt
tatgacctgcgtaaagcgggcggcgactggcagctttatgccgctggtgcagtcgacgat
cccgccggggccgatcctgaaccgacgccggaaccgacaccggagcctacgccggaaccg
acaccggagcctacgccggaaccgacaccggagcctacgccggaaccgacgccggaaccg
acaccggaaccgacgccgacaccgacaccgacaccgacaccgacacccatcacgcctccc
gacaggccagatatcaccaacgcggcggatgcgggcgctaatttcctgaatatcagctat
ctgatgaactatgcggagatgcaatcgctgttgcagcgctttggcgacctgcgccagaag
cagtcgctcggcgacggctgggtgagaggcatcggcggacgctttgacagcttcgccagc
ggcaaactgagcgatttcagcctgagctattccggcatgcagttcggcgtcgaccgacag
ttaaggccggatctgccggtcgtagcgggtgcctttatgggcgtcactcacggcaacgct
cattacgccagcggcagcggcgaccaaacttccagccatgcgggtttttatctcactgcg
atgaccgacagcggcctgtggtttgacggcgtggtgaaatattcacgcatgaaaagcggc
ttcaacgtcagggattcgcagggacagggcgtcagcggctatggcgcggcgaataactac
aacctgtcgctggagagcggcaaacgcttcgctctgacgcaggcggaacagggcttttat
ctggagccgcagttgcagcttgcctggagccatcagcagggggatacgctacgcgcatca
aatggcctgcgcatcgacctcgacggctacgattcgctgttgggacgcgccagcgcgctg
ctcggctatcaaatcacgcaggaggcgcgccagctgaatctctacctgaaaagcggcgtg
gtgcgggaattcaaaggcgacaccggctatcgtctgaacggctcgccggagcgccacagt
ttccgcggcaacggctggaataacgggctgggcgtcagcacgcaggtcgccgggcagcac
ctgttttaccttgaaggagacagcaccaccggtcaccagtttaatcagcgacagttcagc
gcgggctaccgctttaccttttaa
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