Mixta calida: C2E16_12860
Help
Entry
C2E16_12860 CDS
T05419
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pcd
Mixta calida
Pathway
pcd00521
Streptomycin biosynthesis
pcd00523
Polyketide sugar unit biosynthesis
pcd00541
O-Antigen nucleotide sugar biosynthesis
pcd01100
Metabolic pathways
pcd01110
Biosynthesis of secondary metabolites
pcd01250
Biosynthesis of nucleotide sugars
Module
pcd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
C2E16_12860 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C2E16_12860 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C2E16_12860 (rfbC)
Enzymes [BR:
pcd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
C2E16_12860 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AUY25712
LinkDB
All DBs
Position
2685754..2686302
Genome browser
AA seq
182 aa
AA seq
DB search
MKVIDTRISDVKIIQPTVYGDARGFFLETFEKRRYQQLLGIDAEFVQDNYSRSGRHVLRG
LHFQRTQPQGKLVRVARGEVFDVAVDIRPDSPTFGQWTGAILSEENQTQLWIPPGLAHGF
VVLSESADFEYKCTDYYNPQDEACLLWNDPTINIEWPVAAPQLSDKDKKGLPLTELMQCA
YC
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttatcgatacgcggattagtgatgtaaaaattattcagcccaccgtctatggc
gacgcgcgcggatttttcctggaaaccttcgaaaaacgccgctaccagcagctgctgggc
atcgacgcggagtttgtacaggacaactattcacgctcaggccgtcacgtactgcgcggg
ctgcatttccagaggacccagccgcagggcaagctggtgcgcgtggcgcgcggcgaagtg
tttgacgtcgcggtggatattcgccccgattcgcccaccttcggccagtggaccggcgcg
atcttatcggaagagaatcagacgcagctttggatcccgcccggcctggcgcacggtttt
gtcgtattgtccgagagcgccgatttcgaatataaatgcaccgactattacaacccgcag
gatgaagcctgcctgttgtggaacgaccctacaataaatatcgagtggccggtagctgcc
ccgcagctgtcagataaagataaaaaaggattacctctaacggagctcatgcaatgcgca
tattgttaa
DBGET
integrated database retrieval system