Mixta calida: C2E16_18855
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Entry
C2E16_18855 CDS
T05419
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
pcd
Mixta calida
Pathway
pcd00040
Pentose and glucuronate interconversions
pcd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
C2E16_18855
Enzymes [BR:
pcd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
C2E16_18855
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Motif
Pfam:
Pectate_lyase22
PD40
SGL
Motif
Other DBs
NCBI-ProteinID:
AUY26750
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Position
3957177..3958343
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AA seq
388 aa
AA seq
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MAKGNRVHLPFHHFTDEKTGAEMVRLTPPEVLCHRNYFYQKCFFNDGSKLLFAGEFDGNR
NYYLLDLQEQQATQLTEGAGDNTFGGFLSPDDRFLFYVKNERQLRCVDLQTLEERVVYTV
PEAWVGYGTWVANSDCTRLVGIEIDRQGWEPLSDWQVFKTFFEKKPHCRLLRVDLQTGEA
QTILEQRLWLGHPIYRPFDDHTVAFCHEGPHDRVDARMWLIDEDGANMRKVKDHAEGESC
THEFWVPDGSALIYVSYHKARADREICRFDPVTGHNEVLMTMPACSHLMSNQNGTLLVGD
GSGTPVDVQDTKGYTIDNDPMLWLFDVATRQHRPLAAHNSSWRVLDGDRQVTHPHPSFTP
DEKQVLFTTDYEGQPALYLATIKDNFFS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaggaaaccgtgtacatttgccttttcatcattttaccgatgaaaagaccggt
gccgaaatggtgcgattaacgccgcctgaggtgttatgtcatcgcaactatttttatcag
aagtgctttttcaacgatggcagcaagctgctgttcgcgggcgagtttgacggcaaccgt
aactattacctgctcgatttacaagaacagcaggcaacgcagttgacggaaggcgcgggc
gataatacgtttggcggcttcctctcgccggacgatcgatttctgttctatgtgaaaaac
gaacgccagttgcgctgcgtcgatttgcagactctggaagaacgcgtcgtctataccgtg
ccggaagcatgggtcggctacggcacatgggtcgccaacagcgactgcaccaggctggtc
ggcatcgaaattgaccgccagggctgggagccgctcagcgactggcaggtatttaagacc
ttctttgaaaagaaaccgcactgccgtctgctgcgggtcgatctgcaaaccggcgaggcg
cagaccatccttgaacagcgtctgtggctgggacatcccatctaccgtccgtttgacgac
cataccgtcgccttctgccacgaaggtccgcacgatcgcgtcgacgcgcgcatgtggctg
atcgatgaagacggcgccaatatgcgcaaagtcaaagatcatgccgagggtgaaagctgc
acccatgaattctgggtgccggacggatcggcgctgatctatgtctcctaccacaaggcg
cgagccgatcgcgagatctgccgcttcgatccggtcaccggccataatgaggtgctgatg
accatgccagcctgttctcacctgatgagcaaccagaacggcacgctgctggtaggcgac
ggctccggcacgccggtggatgtgcaggataccaaaggctataccatcgacaacgatccg
atgctgtggctgtttgacgtggcgacgcgccagcatcgcccgctggcggcgcataacagc
tcctggcgcgtgctggacggcgaccgtcaggtcacgcatccgcatccgtcatttacgccg
gacgaaaaacaggtgctgttcaccacagactatgaaggccagccagcgctctatctggca
accatcaaagataactttttcagctaa
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