Polaribacter cellanae: J3359_13935
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Entry
J3359_13935 CDS
T08224
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcea
Polaribacter cellanae
Pathway
pcea03030
DNA replication
pcea03430
Mismatch repair
pcea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J3359_13935
03430 Mismatch repair
J3359_13935
03440 Homologous recombination
J3359_13935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcea03032
]
J3359_13935
03400 DNA repair and recombination proteins [BR:
pcea03400
]
J3359_13935
Enzymes [BR:
pcea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J3359_13935
DNA replication proteins [BR:
pcea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J3359_13935
DNA repair and recombination proteins [BR:
pcea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J3359_13935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
RNase_H_2
GIY_YIG_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QTE21904
UniProt:
A0A975CM81
LinkDB
All DBs
Position
complement(3101860..3103248)
Genome browser
AA seq
462 aa
AA seq
DB search
MLYAVVDIETTGNGYKGQKITEISVLIFDGKTVVNEFTSLVNPEQNIPPFITNLTGITNA
MVRNAPKFCEIAKQVEEITQDTIFVAHNVNFDYNIIKEEFKRLSFDFKRKKLCTVRLSRK
IIPGLRSYSLGNICSVENISINGRHRAKGDAEATVELFRRIIERDTNFTINSFLNPKSRQ
ATLPPLLDKKIVDNLPEKHGVYYFKNDKKEVIYVGKANNIKQRVISHFYDRKKKEQEMCI
ETAHISCTETGSELLALLLESAEIKHRYPKYNRAQKHNREAIGLFTYEDQKGIIHLAFNK
IKLTPNPIMSFFSLTACRTFLENLCQEFELCPKYCHLQTNVASCFHHKIKECRGVCCDKE
TAENYNKRVQEAIISASIGSKNIVLKETGRTPNEIGFVLILDGNYKGFGYLDVNQDAQLE
SPEDYQFFVQPQKDNSDIQKILTAYIRKKEDLKDLENEEIKI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgttatacgctgttgtagacatagaaaccacaggaaacggatataaaggccaaaaaata
accgaaatatctgttttaatttttgatggaaaaactgtggtaaatgagtttacatctcta
gtaaatcccgaacaaaacattccgccttttataaccaatcttactggcataacaaatgct
atggtaagaaacgcacctaagttttgcgagattgcaaaacaagtggaagaaattacacaa
gacaccatttttgttgcacataatgtaaatttcgattacaatattataaaagaagaattc
aagcgattgagtttcgattttaaacgaaaaaagctctgtacagttcgtttgtcgagaaaa
ataattcctggtttgcgttcttatagtttgggtaatatttgcagtgtagaaaacatttca
attaatggaagacacagagcaaaaggcgatgcagaagcaacagtagaattatttcgaaga
attatagaaagagataccaattttacaattaattcttttttaaacccaaaatcgagacaa
gctactctacctccacttttagataaaaaaatagtagacaatttacctgaaaaacatggc
gtttattattttaaaaatgataaaaaggaagttatttatgttggaaaagccaacaacatc
aaacagagagtaattagtcatttttacgaccgaaagaaaaaagaacaagaaatgtgtata
gaaactgcacatatttcttgcacagaaactggaagtgaattattggctttattattggaa
tctgctgaaataaaacatcgctatccaaaatacaatcgagcacaaaaacacaatagagaa
gcaatagggctttttacctacgaagaccaaaaaggaattatccatttggcttttaacaag
ataaagttaactccaaacccaattatgagtttcttctcgttaacagcttgtagaacgttt
ttagaaaatctgtgtcaggaatttgaattgtgtcctaagtattgtcatttacaaaccaat
gttgccagttgttttcatcataaaattaaagaatgtagaggcgtttgttgcgataaagaa
accgcagaaaattataataagcgagtacaagaagccattatttctgcaagtattggttct
aaaaatatcgttttaaaagaaactggaagaacaccaaatgaaattggttttgtactaatt
ttagatggaaattacaaaggttttgggtatttagatgtaaaccaagatgcacaattagaa
agtccagaagattatcaattttttgtacaaccacagaaagacaatagcgatattcaaaaa
atattgactgcttacatccgtaaaaaagaagatttaaaagatttagaaaatgaagaaatc
aagatataa
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