Polaribacter cellanae: J3359_16325
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Entry
J3359_16325 CDS
T08224
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pcea
Polaribacter cellanae
Pathway
pcea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J3359_16325 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcea03400
]
J3359_16325 (uvrA)
DNA repair and recombination proteins [BR:
pcea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J3359_16325 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J3359_16325 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
DnaJ_CXXCXGXG
AAA_22
nSTAND3
AAA_21
Viral_helicase1
DUF1924
AAA_24
cobW
T2SSE
AAA_25
MeaB
AAA_18
Exo84_C
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QTE22351
UniProt:
A0A975H6D3
LinkDB
All DBs
Position
complement(3673836..3676658)
Genome browser
AA seq
940 aa
AA seq
DB search
MKDQEYIEVYGARVHNLKNIDVKIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIETF
SAYARQFLGGLERPDVDKIDGLSPVISIEQKTTNKSPRSTVGTITEIYDFLRLLFARAGD
AYSYNTNEKMVSYSDEQIKELILTDFADKKIAVLAPLIKSRKGHYRELFEQISKQGFLRV
RVDGEIREIEKGMKLDRYKNHDIEVVIDRLAINKSSEKRLDETIKTALYSGNNIMMVIDI
DDNNPRYFSRELMCPTTGIAYPSPEPNTFSFNSPKGACSSCNGLGITNEINLDKVIPDNS
ISIKNGGIIPLGEQKNSWIFKQLQNIAERYKFKLTDSIKDIPKEALNIILNGGNETFEIE
SKTVGVTRNYKIDFEGIVAFIENQYNNAESTSIKRWAKNFMDEVTCSTCNGKRLKKEALH
FKITDKNISDLAQMDVTELAKWFKNIEKELSEKQVTIASEILKEIRTRIQFLLDVGLDYL
TLDRTSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNQKLIDSLIKLRDIG
NSVLVVEHDKDMMEHADFVFDIGPGAGRHGGEIVSAGTFKELKKQRTLTSDYITGKREIA
VPKKRREGNGKIIKLKGASGNNLKNVSVEFPLGKMICVTGVSGSGKSTLINETLYPILNA
HIYRGVKKPMPYKKIEGLEHVDKVIDIDQSPIGRTPRSNPATYTKTFDEIRSLFAKTPEA
AIRGYKPGRFSFNVKGGRCETCQGGGVRVIEMNFLPDVHVECETCQGKRFNRETLEIRYK
GKSISDILNMTIEDATDFFENIPKIHRKLKTIKDVGLGYITLGQQSTTLSGGEAQRIKLA
AELSKRDTGNTFYILDEPTTGLHFEDIRVLMEVLNKLADKGNTVLIIEHNLDVVKLADYI
IDVGMEGGKKGGKILCTGTPEEITKHKTSYTAKFLKKELI
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaccaagaatacatagaagtttacggagccagagttcataatttaaagaatatt
gatgtaaaaattccacgagaaaaattagtggtaattactggtttaagcggaagtggaaaa
tcttctttggcttttgacaccatttatgctgaagggcaaagacgttatattgaaactttt
tctgcctatgcaagacagtttttaggtggtttggaaagacctgatgtcgataaaattgat
ggactttcgccagttatttccattgaacaaaaaacaaccaataaaagtccacgttctaca
gttggaacgattacagaaatttacgattttttacgattattgttcgcaagagctggtgat
gcttattcttacaacaccaacgaaaaaatggtaagttattcagacgaacaaataaaagag
ttaattcttactgattttgctgataaaaaaatagctgttttagctcctttaatcaaatct
agaaaaggacattatcgtgaacttttcgaacagatttctaaacaaggttttttgcgagtt
cgtgtggatggagaaattcgagaaatcgaaaaaggaatgaaattggatcgatacaaaaat
catgatattgaggttgtaatcgatcgattggcaataaacaaatcatcagaaaaaagatta
gacgaaaccataaaaactgccttatattctgggaataatattatgatggttattgatatt
gacgataacaatcctcgttattttagtcgagaactcatgtgcccaacaacaggaatcgcc
tatccaagtccagagccaaatacattttctttcaactctccaaaaggtgcttgtagctct
tgtaatgggttggggataaccaatgaaattaatttagacaaggtaattccagataacagt
atttctataaaaaacggaggaattattcctttaggagaacaaaaaaatagttggattttt
aaacaattgcaaaatattgcagaacgctataaatttaaattaacagattctataaaagat
attccgaaagaagctttaaatattattttaaatggtgggaatgaaacttttgaaattgaa
tctaaaactgttggagttaccagaaattacaaaatagattttgaaggaattgttgctttt
atcgaaaatcaatataacaatgcagaaagtacttctataaaaaggtgggcaaaaaacttt
atggacgaagttacttgctctacctgtaatggaaaacgtcttaaaaaagaggcacttcat
tttaaaattaccgataaaaacattagcgatttggcacaaatggacgtgactgaattggct
aaatggtttaagaatatagaaaaagaattatctgaaaaacaagttacaattgcatcagaa
atattaaaagaaatacgcactcgtattcaatttttattagatgttggattggattattta
acgttagatagaacatccaaatcactttctggtggtgaagcacaaagaattcgtcttgct
acacaaattgggtcgcaattagtgggtgttttatatattttagatgaaccaagtattggt
ttgcatcaacgagacaatcaaaaattaatagactctttaattaaattacgagacattgga
aactctgttttagtggttgaacacgacaaagacatgatggaacatgccgattttgttttc
gatattggtcctggagcaggaagacatggaggagaaattgtttctgctggaacttttaaa
gaattaaaaaaacaaagaactttaacttcggattatattacaggaaaaagagaaattgct
gttcctaaaaaacgtagagaaggaaatggaaaaataatcaaattaaagggtgcttctgga
aataatttaaaaaatgtttctgtggaatttcctttaggaaaaatgatttgtgtcactggc
gtttctggaagtggaaaatcaactttaattaacgagaccttatatccaattttaaacgca
catatttatagaggtgtaaaaaaaccaatgccttacaaaaaaattgaaggtttagagcat
gtagataaagttattgatatcgaccaatctccaattggaagaacgccacgttctaaccca
gcaacctatacaaaaacgtttgacgaaattagaagtttattcgcaaaaaccccagaagca
gctattcgtggctacaaacctggtcgtttttcttttaatgtaaaaggcggacgttgtgaa
acatgccaaggtggaggagttcgagtgatagaaatgaactttttaccagatgttcatgta
gaatgtgaaacttgccaaggaaagcgcttcaatagagaaactttagaaattcgttataaa
ggaaaatctatttccgatattttaaatatgacgattgaagatgctactgatttctttgaa
aacattcctaaaattcatagaaaattaaaaacaattaaagacgttggtttgggctatatt
acattagggcagcaatctactacactttctggtggagaagcacaacgaattaaattggct
gcagaactatctaaaagagatactggaaatactttctatattttagatgaaccaacaaca
ggtttgcattttgaagatattagagtgctaatggaagtcttgaataaattagccgacaaa
ggaaatactgtgctaattatagaacacaatttagatgttgtaaaattagcagattatatt
attgatgtgggtatggaaggtggaaaaaaaggtggaaaaattttatgcacaggaactcca
gaagaaattacaaaacataaaacgagttatacagctaagtttttaaaaaaagaattaatt
tag
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