Polistes canadensis: 106784139
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Entry
106784139 CDS
T05611
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pcf
Polistes canadensis
Pathway
pcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106784139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcf03041
]
106784139
Enzymes [BR:
pcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106784139
Spliceosome [BR:
pcf03041
]
Complex A
U2 snRNP components
U2 related factors
106784139
Complex B
106784139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
106784139
NCBI-ProteinID:
XP_014598835
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRTGTPEKKRRRSRSRDRERERDKGRHRERRSRSRDRDRE
RSDRRDRSDRDRDRDRREKRGDSKEKRLTGSKSSRSGKERSNRSRSRDRKEKEKGETEEL
PFDHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKTSILANLQLPMKK
WSLEDDSDEETPVVQNSNKEVKEEGAFKEEVEETKEETKDEEEEVDPLDAFMAEVQEEVR
KVNKIDSKTPKNTNNGTGPGNQQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEE
GENLHETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTSEEVETYKEELEG
IRVKGKGCPKPIKSWAHCGITKKELDVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTG
SGKTLAFLLPMFRHILDQPPLADGDGPIALIMSPTRELCMQIGRDSKKFTKSLGLSHVCV
YGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGF
EPQVMRIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVV
LEEDQKFYKLLEILGHYQDKGSAIVFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRD
STILDFKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYA
YTFITSEQERYAGDILRAHELAGVPVPEPLRQLWEAYKARQAADGKKVHTGGGFSGKGFK
FDESEAALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPSAANIA
VPGQPVTSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVA
EQLAAKLNTKLNYQPREEDLVETDSETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQ
ISEYSEAGLTVRGTYIAPGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQ
ASGAHTASRGRYKVL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggtccgaagcagtgacaaggatagacatcatagaagacggtctagatcaagatcaaga
tcacgtactggtacaccagaaaagaaacgcagacgttccaggagtagagaccgagaaagg
gaaagggataagggacgccacagggaaagaaggagtcgttcaagagatagggacagggaa
agaagtgatagaagagaccgctcagacagagatagagatcgcgataggagagagaaacgt
ggagacagtaaagaaaagcgtcttacaggctcaaagtcttcacgctcgggtaaagagcga
tccaacagatctcgatcaagggatagaaaggaaaaggagaaaggtgaaactgaagaatta
ccattcgatcatacaaaattagataaggaagaggaacaaaaacgactggaattagaaatg
caaaagagaagagagaggatagaacgatggcgtgctgaaaggaagaaaaaggagttagag
gcaactaaaaaagatggtaagacatctattttggcaaatcttcaattgcctatgaaaaaa
tggtccctcgaggatgacagtgatgaagaaacgcctgtggttcagaatagcaataaggaa
gtcaaagaggaaggcgctttcaaagaagaagtagaagaaactaaagaagagaccaaagat
gaagaggaagaagttgaccctcttgatgctttcatggcagaggtccaagaagaagtcagg
aaagtaaataaaattgacagtaaaactccaaagaatactaataatggtacaggtcctgga
aatcaacaaagtggtggtgttgttattgttacgggtgtagctaaaaaaaaagtacagaaa
caaaaaggagaattaatagaacaaaatcaagatggtcttgagtactccagcgaagaggag
ggagaaaatcttcacgagactgcggctggaattgctaataaacaaaaaagagaactagct
aaagtagatcatgcaacaacagagtatcaaccttttagaaaatcattttatgtagaagta
cctgaaattgctaggatgacatcagaagaagtagaaacttataaagaagaactcgaaggc
atacgtgtaaaaggtaaaggatgtccaaaaccaattaaatcttgggcacattgtggtata
actaaaaaagaattagatgttctgaaaaaacttggatatgaaaaaccaacccctatccaa
tgtcaagctattccagctataatgtctggaagggatcttataggaattgccaaaactgga
agtggaaagacattagcatttttattaccaatgtttcgtcacatcttagatcaaccacca
ttagctgacggagatggaccaatcgcattaataatgtctccgactcgagagctttgtatg
cagattggacgagactcaaaaaaattcacaaaatctttaggtctttcgcatgtatgtgtg
tacggtggtactggtatatctgaacaaatagcagaattaaagaggggtgcagaaataatc
gtttgtacacctggaagaatgattgacatgttagcagcaaatagtggaagagttactaat
ttacgtagagtgacttacgttgttcttgatgaagctgacagaatgttcgacatgggtttt
gaaccacaagtaatgcgtataatggaaaatgttagaccagatagacaaacggttttattc
agtgctacgtttccaagacaaatggaagcacttgccagaagaatacttactagacctgta
gaggtacaagttggtggtcgttccgtagtttgcaaagacgttgaacagcatgtggtggtg
ttagaggaagatcaaaagttctacaaacttctcgaaattcttgggcattatcaagataaa
ggttctgctattgtatttgttgacaaacaagaaaacgcggatacacttttgaaagatctt
atgaaagcttcctattcgtgcatgtctttacatggaggtattgatcaatgtgacagagat
tcaacgattttagattttaaagctggacgaactaaattacttgttgccacgtctgttgct
gccagaggattagatgttaaacatcttgtacttgttgtcaattatgattgtccaaatcat
tatgaagattatgtacaccgttgtggtagaactggcagagctggaaataagggatatgca
tacacatttataacatctgaacaagaacgttatgcaggtgatattttacgtgcgcatgaa
ttggcaggggtacccgttccagaacctttacgacagttatgggaagcctataaggctcgc
caggcagcagatggaaagaaagtacatacaggaggtggtttcagtggtaaaggatttaag
ttcgacgaatcggaagcagctttagccaacgagaaaaagaaattccagaaagcagctctt
ggtctgcaagattccgacgacgaagatattgaaaatgatattgatcaacaaatcgaaagc
atgcttgctcctaaaagaacggttcgcgaaattgcaagaccatctgctgcaaatattgca
gttcctggtcaaccagtgacaagtgctaccgataaattagaattggctagaagacttgca
tccaagatcaacattgctaaaaatttgggtgcagaagcaaaaggagctacccaacaagca
gcagaagctatacttaaaggtgctggtcctacaaatttgattacggcaaagaccgttgcc
gaacaattggctgctaaattaaataccaaactcaattatcaaccacgggaagaagatctc
gtagaaaccgactctgaaactggcgaacaaaccttccgaaagtacgaagaggaattagaa
ataaatgatttccctcagcaagcaagatggcgtgttactagcaaggaagctttagcacaa
atctctgaatattctgaagcaggtcttacagttaggggaacttacattgctcctggtaaa
gcaccgccagaaggcgaaagaaaattatatcttgcaattgagtcaaccagtgaattagct
gttagcaaagctaaggcagaagtatctcggcttataaaagaagaattaattaagttgcaa
gcatctggagcccatactgcttcacgaggacgatataaagttttataa
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