Polistes canadensis: 106787465
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Entry
106787465 CDS
T05611
Name
(RefSeq) histone deacetylase Rpd3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pcf
Polistes canadensis
Pathway
pcf03082
ATP-dependent chromatin remodeling
pcf03083
Polycomb repressive complex
pcf04213
Longevity regulating pathway - multiple species
pcf04330
Notch signaling pathway
pcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106787465
03083 Polycomb repressive complex
106787465
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106787465
04350 TGF-beta signaling pathway
106787465
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
106787465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcf03036
]
106787465
Enzymes [BR:
pcf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
106787465
Chromosome and associated proteins [BR:
pcf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
106787465
HDAC complexes
Sin3A-HDAC complex
106787465
BRAF-HDAC complex
106787465
REST complex
106787465
SHIP complex
106787465
MiDAC complex
106787465
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
106787465
Heterochromatin formation proteins
Other heterochromatin formation proteins
106787465
Chromatin remodeling factors
NuRD complex
106787465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
106787465
NCBI-ProteinID:
XP_014605319
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSTMSHGKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGTEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDGAVIEDSEAEEKINPDERLSQRDLDKRIQHENE
YSDSEDEGDGGRRDNRSFKNSRKRPRLEKGQEGIDSDIKKEEDIKSEVKENDKDEKMNVS
NEETKKDGGANP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaatgtctcacggaaagaagcgagtttgctactattatgacagcgatattgga
aattactattatggtcaaggccaccctatgaaaccacatcgcataaggatgacacataat
ttgctactcaactatggtctttatagaaagatggaaatttatagaccacataaagctact
gctgatgaaatgacaaagtttcatagtgacgagtatattagatttttaagatcgatcagg
ccagacaatatgtcggaatataacaaacaaatgcagagatttaacgtgggtgaagattgt
cctgttttcgatggcttgtatgaattctgccaattgtcagccggtggttctgtagcagct
gcagtaaaacttaataaacaagcatcagaaatttgtattaattggggtggtggattgcat
catgccaagaaaagcgaagcatcaggtttctgttacgtaaatgacattgtactcggaatt
ttggaattacttaaatatcatcaaagagttttatacattgatattgatgttcatcacggt
gatggtgttgaggaagcattttacacaacagatagagtaatgactgtttctttccataaa
tatggagagtattttcctggtacaggagatctcagagacattggtgctggcaagggtaaa
tattatgcggtcaacatacctttacgggatggcatggatgatgaaagttacgagtccatt
tttgtacccataatttcaaaagttatggaaactttccaaccgtcagcagttgttttacaa
tgcggagcagattccttgacaggtgatcgacttggttgttttaatttaaccgtaagagga
catggaaaatgtgtagaatttgtcaagaaatataatctaccattcttaatggttggagga
ggtggctatacaataaggaatgtatctagatgttggacatatgaaacatctgtggctcta
ggaacagaaatagctaatgaacttccatacaatgactattttgaatactttggacctgat
ttcaagttacatataagtccatcaaatatggctaatcaaaacacacctgaataccttgag
aagataaaaacaagattatttgaaaacttaagaatgttgcctcacgcgccgggtgttcaa
gtgcaagcgattccggaggatggtgctgttatcgaagattcagaagcagaggagaaaata
aatcctgacgaaagattatcgcaaagagatttagacaaaaggatacaacatgaaaatgaa
tatagcgacagcgaagacgagggtgatggtggtagaagagacaacaggtcttttaaaaat
tccagaaaacggccaagactagaaaagggtcaggaaggtatagatagtgatataaaaaaa
gaagaggatatcaaatctgaagttaaagagaacgataaggacgagaaaatgaatgtttcg
aatgaggagacgaaaaaagatggtggggcgaatccctga
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integrated database retrieval system