KEGG   Polistes canadensis: 106789870
Entry
106789870         CDS       T05611                                 
Name
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
pcf  Polistes canadensis
Pathway
pcf03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    106789870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcf03400]
    106789870
Enzymes [BR:pcf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     106789870
DNA repair and recombination proteins [BR:pcf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     106789870
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT DNA_ligase_IV RNA_ligase BRCT_2 mRNA_cap_enzyme Rep_fac_C
Other DBs
NCBI-GeneID: 106789870
NCBI-ProteinID: XP_014609880
LinkDB
Position
Unknown
AA seq 898 aa
MSVSLSSRIKFKQLCEVLERIIKACASEKLKILQEFIQQYQKDGAKLKEENPNANISIFP
VLRLLLPECDRERKSYNLKQKLLVNIYIRVLCLGKSSKDAKKLINYRIPTSNKSNGSDLA
EIVYSIVRKQLSPQKESFTIDRINTFLDDISKASEENKNKDELFKELFRQISALELKWLT
RIILKNLKLGIGTQKVLQVYHPEAYEYFCTTSELRKICDNLDRNKKRINFDIEVFSFFKP
MLLERFAIKDAEKLFYNKDEYFVQTKFDGERSQIHMKDGIFKYLTRQGFDITSNWGYGKS
NSDGFLTSILSRRLNQQCKSIILDGEMMGWHKQKKMFGSKGMSYDVKKLTAKSSFQPCFV
AYDIILYNDNLLINRPYKERLNILKDAFQDEEGSLIKCQNTIISNSKDLLDIFNKSLVNK
EEGIVIKKSDSVYKPNIRNGTGCYKLKAEYSENLIQDIDLIILGGYYGEGGLIKSFMMGV
AEVSEKEGEEPKQFFSVVSVSNGITMKELKEFHKKFEKHWIKDRPNCIIGPRIEPPDLWI
RPEHSLILTLRATEITKSDDYSIGYTLRFPRIVKIREDKPWYSACTITEFLSLIKNAGVI
HKLTKRQATMNDIETTTEPVIKPKKMPKSTVSVFEEDLYKDKQLNKNLVPITRLLDGKEI
CVINGNDEISKEEIIEQLLLHRAKVVQNPTKETYCVIVGNDKKAKASNVIKTNKYDVVTL
DWYKRITKEENWGALESFLPWDFLSIRDTTKQLIMEKYDEYYDSYTMDADEESLQRSLKK
MEPMIKEEEFTFTEEQELYKELDKELFDNGISPFSVFKQIIGYFKQCSDSTKFKFRFMGG
LIKEDINEHINYIFIEDKSLISQVNDIMNESMKVIDSKWIDECFQDQKLYSIDKYIIK
NT seq 2697 nt   +upstreamnt  +downstreamnt
atgagcgtatcgttatcatcaagaattaaatttaaacaattgtgtgaagtcttggaaaga
attattaaagcttgtgcctccgaaaagcttaaaattctacaagaatttattcaacaatat
cagaaggatggtgctaaattgaaagaagaaaatccaaatgcgaatatttcaatatttccc
gtattaagattgctcttaccagaatgcgaccgtgaacgtaaatcatataatttgaagcag
aaattattggtgaatatttacattcgtgtactttgtctaggaaagtcgagtaaagatgct
aagaaattgataaattacagaatacctacttcaaataaatctaacggaagtgatctagct
gaaatagtttattcgattgtgcgaaaacaattgtcaccccaaaaggaatcatttacaata
gatagaataaatacatttttagatgatatatcaaaagcgagcgaagaaaataaaaataaa
gatgaattattcaaagaattgtttagacagataagcgcgttagaattaaaatggttgact
cgtattattttaaaaaatttaaagttgggcattggaacacaaaaagtgttgcaagtttat
catccggaagcatatgaatatttttgtacaacttctgaactacgaaaaatttgtgataat
ctcgatcgaaataaaaagagaattaattttgatattgaagttttctcttttttcaaaccc
atgttgttggaaagatttgccattaaggatgcagaaaaacttttttacaataaagatgag
tacttcgtacaaacgaaatttgatggagaacgttctcaaatacatatgaaagatggtata
tttaaatatttaacgagacagggatttgatatcacaagtaactggggatatggaaaaagt
aattcagatggttttctaactagtatactttcacgtcgtttaaatcaacaatgcaaatct
atcattttggatggcgaaatgatgggctggcataaacaaaagaaaatgtttggatcgaaa
ggtatgagctatgacgttaaaaagcttacagctaaaagttcttttcaaccctgctttgtg
gcctatgatattattctttacaatgacaatctacttattaatcgaccttataaagaaaga
ttgaatatattaaaagatgcatttcaagatgaagaaggttcattaattaaatgccaaaat
acgatcatttctaacagcaaagatctattggatatttttaataaaagtcttgtcaataag
gaagaaggaattgttatcaaaaaatctgattccgtttacaaaccaaatattcgcaatgga
actggttgttacaaattaaaagccgagtattcagaaaatctaatacaagatattgatttg
attatacttggaggctattatggcgaaggtggtttgataaaaagttttatgatgggtgtt
gccgaagtatctgaaaaagaaggggaagaacctaaacaatttttttctgtcgtgtcagtg
agcaatggtatcacaatgaaagaattgaaagaatttcataagaaattcgaaaagcattgg
attaaagaccgtcctaattgtataattggtcctaggatagagcccccagatttatggatt
cgacctgagcactcgttgattttaacacttagagcaacagaaataacaaaaagtgatgat
tattcaatcggttatactttacgttttcctcgtatcgtaaaaattagagaagataagcct
tggtacagcgcttgcacgatcacagaatttttatcgttgataaagaatgcaggagtaatt
cataaattgactaaaagacaagcaacgatgaatgacatcgaaactacaacagaacctgtt
attaaacctaagaaaatgcctaaatcaactgtgtcggtgttcgaagaagatttatataag
gacaaacaattgaacaaaaatcttgtaccgataacacgtctgttagacggaaaagaaatt
tgtgttattaacggtaatgatgaaatatccaaagaagaaataatagaacaacttttactg
catagggcaaaagttgtgcaaaatccaacaaaagaaacttattgcgtcattgttggaaat
gataaaaaagcaaaagcaagtaatgtaataaagacgaacaaatatgatgtggttacgtta
gattggtacaaacgtattaccaaagaagaaaattggggtgcactggagagttttttacca
tgggattttctttctattcgtgacacgacaaaacaattaataatggaaaaatatgacgaa
tattatgatagttatacaatggacgccgacgaagaaagtttacaacgttctttaaaaaaa
atggaacctatgataaaggaagaagaattcacttttaccgaagaacaagaattgtataaa
gaattggataaagaattgtttgacaatggaatatctccgttttctgtcttcaaacaaata
attggatattttaaacaatgttccgattctacgaagtttaaatttcgttttatggggggt
ctaataaaagaagatataaacgaacatattaattatattttcatcgaagataaatcatta
atttctcaagttaatgatattatgaatgaatcaatgaaagtaattgatagtaaatggata
gatgaatgttttcaagatcaaaaattatattccatagataaatatattattaaataa

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