Pseudomonas chlororaphis PA23: EY04_10225
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Entry
EY04_10225 CDS
T03201
Name
(GenBank) RND transporter
KO
K18300
outer membrane protein, multidrug efflux system
Organism
pch
Pseudomonas chlororaphis PA23
Module
pch_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pch02000
]
EY04_10225
01504 Antimicrobial resistance genes [BR:
pch01504
]
EY04_10225
Transporters [BR:
pch02000
]
Other transporters
Pores ion channels [TC:
1
]
EY04_10225
Antimicrobial resistance genes [BR:
pch01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
EY04_10225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
BMC
DUF5102
Motif
Other DBs
NCBI-ProteinID:
AIC19253
LinkDB
All DBs
Position
2249495..2250877
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AA seq
460 aa
AA seq
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MNNLLRFPALAFTAALLAACAAPTLPPAVEAPAGRFVNAPQIPAAGIAEQWWTLYHDPLL
DRLVARALEENLDLQIALARIDASRALRGVAAAGASPELNLGASAARQRISADQAGFSDP
LITEPLSLGLDASWEIDLFGRIREGVRAADAELQASAEEARGVKVALVTEVVQAYAQARG
LEERLSIVRQNAESQSRTLQLTEQLYAAGSSPQADLLRARSQSESTAAQVPALQLEWQRS
LHRLAVLLAQPSEALYQQFAASPAQLSEVDLVAAGTPADLLRRRPDIRAAEARLIAAYAR
VGVAKADLLPRLSLSAALGSLVDGVSAANLASSTFWLAGINASVPLLDGGRRRAVVELRD
AEGRQALLGYHRTVLGAVAEVESALAAARRNAESQQHLASAAAQASSAAQQIQRSWAAGE
APFLDVLQAQRVELTAQNALSRIKTAQLQNQAVLVRALGG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaataacctgctgcgttttcccgccctggcctttaccgcggcgctgcttgcggcctgc
gccgcgccgaccttgccaccggctgtcgaggcgcccgccgggcgtttcgtcaatgcgccg
caaataccggcggcgggcattgccgagcaatggtggacgctgtaccacgaccccttgctc
gaccgcctggtggcgcgggcgctggaggaaaacctcgacctgcagatcgccctggcgcgg
atcgatgccagtcgtgccttgcgcggcgtcgcggccgccggcgcgagccccgagctgaac
ctgggggccagcgccgcccggcaacggatctcggcggaccaggccgggttcagcgacccc
ttgattaccgagccgctgagcctgggtctcgatgcctcctgggagatcgacctgttcggg
cggattcgcgaaggcgtgcgggccgccgatgccgagctgcaggccagcgcggaagaggcg
cgtggggtcaaggtggcgctggtcactgaggtggtgcaggcctatgcccaggcgcggggg
ctggaagagcgcctgagcattgtgcggcagaacgccgagagccagagccgcaccctgcaa
ctgaccgagcagctgtatgcggcgggcagcagcccgcaggccgatctgctgcgggcgcgt
tcccagtcggaatccactgcggcccaggtgccggccctgcaactggagtggcagcgctcg
ttgcaccgcctggcagtgttgctggcgcagccgagcgaggcgctgtaccaacagttcgcc
gccagcccggcgcaactgagcgaggtggatctggtggctgccggcaccccggccgacctg
ctgcgtcggcgtcccgacatccgtgccgccgaggcccggctgatcgctgcctacgcgcgg
gtcggggtggccaaggccgacctgctgccgcgcctgagcctgtcggcggccctgggctcg
ctggtcgatggtgtcagtgccgcgaacctggccagctcgactttctggctggccggtatc
aatgccagcgtgccgctgctggacggcggacgccggcgcgcggtggtggaactgcgcgat
gccgaggggcgccaggccttgctcggctatcaccgtaccgtgctcggcgcggtggcggaa
gtcgagtcggccctcgccgcggcccggcgcaatgccgagagccagcagcatctggccagt
gccgcggcgcaggccagttcggcggcgcagcagatccagcgctcctgggccgccggcgag
gcgccgtttctcgatgtgttgcaggcccagcgggtcgaactcacggcacagaacgcgctg
tcgcggatcaagaccgcgcagttgcagaaccaggctgtgctggtgcgggcgctcggtggt
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