Pseudomonas chlororaphis PA23: EY04_13560
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Entry
EY04_13560 CDS
T03201
Name
(GenBank) alpha-amylase
KO
K05343
maltose alpha-D-glucosyltransferase / alpha-amylase [EC:
5.4.99.16
3.2.1.1
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch00500
Starch and sucrose metabolism
pch01100
Metabolic pathways
pch01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
EY04_13560
Enzymes [BR:
pch01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
EY04_13560
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.16 maltose alpha-D-glucosyltransferase
EY04_13560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
Mak_N_cap
PUMA
Soc
Motif
Other DBs
NCBI-ProteinID:
AIC19893
LinkDB
All DBs
Position
2999857..3003171
Genome browser
AA seq
1104 aa
AA seq
DB search
MAKKTRSATFIKDPLWYKDAVIYQVHVKSYFDSNNDGIGDFPGLIAKLDYIADLGVNTIW
LLPFYPSPRRDDGYDIAEYRGVSPDYGTLADARRFIAEAHKRGLRVITELVINHTSDQHP
WFQRARKAKAGSKARDFYVWSDDDQKYDGTRIIFLDTEKSNWTWDPVAGQYFWHRFYSHQ
PDLNFDNPQVMKAVLSVMRYWLDMGIDGLRLDAIPYLIERDGTHNENLPETHDVLKQIRA
EIDANYPDRMLLAEANQWPEDTQLYFGDVKGNDGDECHMAFHFPLMPRMYMALAQEDRFP
ITDILRQTPEIPANCQWAIFLRNHDELTLEMVTDRERDYLWNYYAADRRARINLGIRRRL
APLMERDRRRVELLNSLLLSMPGTPTLYYGDEIGMGDNIYLGDRDGVRTPMQWSIDRNGG
FSRADPASLVLPPIMDPLYGYQSVNVETQAGDPHSLLNWTRRMLAIRKQSKAFGRGSLKM
LSPSNRRILAYTREYTGPDGKHEIILCVANVSRSAQAAELDLSAFAGMVPVEMLGGNAFP
PIGQLNFLLTLAPYGFYWFVLAAENQMPSWHVEPAQSMPDFTTLVLKKRLEELLEAPSRT
TLEQSSLPTWLPKRRWFAGKDSAIEQVHIAYGVRFGDPQHPVLLSELEVSGGGQSGRYQL
PFGLLGEEQIGAALPQQLALARVRRGRQVGLITDAFALESFVHNVLQAIQTHTVLPCGEG
EIRFEATQQLAALGLGADSEVRYLSAEQSNSSVVIGGSLVLKLIRKVASGVHPELEMGAY
LTAAGFQHISPLLGSVIRRDGQGDSLLMIAQGYLSNQGDAWEWTQNNLERAIRDELADAM
SEQDQHYNALGELRDFAGMLGQRLGEMHQILAAPTANPDFRAQPSTDKDAQAWARQIGAQ
LERALHLLQQHHAELTAEDQQRVASWTRHKQAILAHIQGLAKQAVGGLRMRVHGDLHLGQ
VLVIKGDAYLIDFEGEPARPLDERRGKHSPYKDVSGVLRSFDYAAALALSGQSLDASAHT
LAARQRVAERYLHEARESFVQAYRLAAASLAHAWQDKNGEDAALALFSLEKAAYEVVYEA
ENRPAWLAVPLRGLQALLSDMKVE
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaaaccaggtcagccaccttcatcaaggacccgctctggtacaaggacgcg
gtgatctatcaggttcacgtcaaatcctatttcgactccaacaacgacgggatcggcgac
tttcccgggttgatcgccaagctcgactacatcgccgacctgggtgtgaacaccatctgg
ctgctgccgttctacccctcgccgcgccgcgacgacggctacgacatcgccgaataccgc
ggcgtcagtccggactacgggaccctggccgatgcccggcggtttatcgccgaggcccac
aagcgcgggctgcgggtgatcaccgagctggtcatcaaccacacctcggaccagcacccc
tggttccagcgggcgcgcaaggccaaggccggctccaaggcgcgggatttctatgtgtgg
tccgatgacgatcagaagtacgacggcacgcggatcatctttctcgacaccgaaaaatcc
aactggacctgggacccggtggccggccagtacttctggcaccgcttctattcccaccag
ccggacctcaacttcgacaacccgcaggtgatgaaggcggtgctgtcggtgatgcgctac
tggctggacatgggcatcgacggcctgcgcctggacgccattccctacctgatcgaacgc
gacggcacccacaacgagaacctgcccgagacccatgacgtgctcaagcagatccgcgcc
gagatcgatgccaactacccggaccgcatgctgctggccgaggccaaccagtggccggaa
gacacccaattgtattttggcgatgtgaagggcaacgacggcgacgaatgccacatggcc
ttccacttcccgctgatgccgcgcatgtacatggcgctggcccaggaagaccgcttcccg
atcaccgacatcctgcgccagaccccggagattcccgccaactgccaatgggcgattttc
ctgcgcaaccacgatgagctgaccctggagatggtcaccgaccgcgagcgcgactacctg
tggaactactacgccgccgaccgccgcgcgcggatcaacctggggattcgccggcgcctg
gcgccgctgatggagcgcgaccggcgccgggtcgagctgctcaacagcctgctgctgtcg
atgcccggcacgccgaccctgtattacggcgacgagatcggcatgggcgacaacatctac
ctgggcgaccgcgatggcgtacgcacgccgatgcaatggtcgatcgaccgcaacggcggc
ttctcccgggccgacccggcgagcctggtgttgccgccgatcatggacccgctgtacggc
taccagtcggtgaatgtcgagacccaggccggcgacccgcattcgctgctcaactggacc
cggcgcatgctggcgatccgcaaacagtccaaggccttcggccgcggcagcctgaagatg
ctgtcgccgagcaaccgccggatcctcgcctacacccgcgaatacaccgggcccgacggc
aagcacgaaatcatcctctgcgtggccaacgtctcgcgcagcgcccaggcggcggagctg
gacctgtcggcgttcgccggcatggtgccggtggagatgctcggcgggaacgccttccca
ccgatcggccagctgaatttcctcctgaccctggcaccctacggtttctactggttcgtc
ctggcggcggaaaaccagatgccgagctggcatgtggagccggcccagagcatgccggac
ttcaccactctggtattgaaaaaacgcctcgaggaattgctcgaagcgccgtcgcgcacc
actctggagcagagttcgctaccgacctggctgcccaagcggcgctggttcgccggcaag
gacagcgccatcgaacaggtgcatatcgcctacggcgtgcgcttcggcgatccgcagcat
ccggtgttgctcagcgagctggaggtcagcggcggcggccagagcgggcgctaccaactg
ccgttcggcctgctcggcgaagagcagatcggcgccgcgctgccgcagcaactggccctg
gcccgggttcgccggggtcgccaggtggggctgatcaccgacgccttcgccctggaaagt
tttgtgcacaatgtcctgcaggcgatccagacgcacaccgtgctgccctgtggcgagggc
gagatccgcttcgaggccacgcagcaactggccgcgctcggcctgggcgcggactccgag
gtgcgctacctgtccgccgagcagtccaacagctcggtggtgatcggtggcagcctggtg
ctcaagctgatccgcaaggtggccagcggcgtgcacccggaactggagatgggcgcctac
ctgaccgccgccggcttccagcacatttcacccttgctcggttcggtgattcgtcgggac
gggcagggcgacagcctgttgatgatcgcccagggctacctgagcaatcagggcgacgcc
tgggagtggacccagaacaacctggaacgggcgatccgcgacgaactggccgacgccatg
tccgagcaggaccagcattacaacgccctgggcgagctgcgcgactttgccggcatgctc
ggccagcgcctgggggaaatgcaccagatcctcgcggcgccgaccgccaacccggacttt
cgcgcgcagccgagcacggacaaggatgcccaggcctgggccaggcagatcggcgcgcag
ctggaacgcgccttgcacttgctccagcagcatcacgccgagctgacggccgaggatcaa
cagcgcgtggcgtcatggacccgacacaagcaggcgatcctggcgcatatccagggcctg
gcgaaacaggcggtcggcggcctgcgcatgcgcgtccacggcgacctgcacctgggccag
gtgctggtgatcaagggcgatgcctacctgatcgatttcgagggcgaaccggcgcggccg
ctggacgagcgccggggcaagcacagcccgtacaaggacgtcagcggcgtgctgcgctcc
ttcgactatgccgcggcgctggccctcagcggccagagcctcgacgcttcggctcacacc
ctggcggcccggcagcgggttgccgagcgttatctgcacgaagcccgcgagtcgtttgtc
caggcgtaccggctggcggcagctagtcttgctcatgcctggcaggacaaaaacggggag
gacgccgcgctggccttgttcagcctggaaaaagcagcctacgaagtggtgtatgaagcg
gaaaaccgtcctgcctggctcgcggtaccgctgcgcgggctgcaggcgctgctgagtgat
atgaaggttgagtga
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