Stutzerimonas chloritidismutans: LLJ08_05585
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Entry
LLJ08_05585 CDS
T07923
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pchl
Stutzerimonas chloritidismutans
Pathway
pchl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LLJ08_05585 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchl03400
]
LLJ08_05585 (uvrB)
DNA repair and recombination proteins [BR:
pchl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LLJ08_05585 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LLJ08_05585 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
HAMP
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UEG62615
LinkDB
All DBs
Position
1213752..1215767
Genome browser
AA seq
671 aa
AA seq
DB search
MSKFELVTRFKPAGDQPEAIRQMIEGIEAGLSHQTLLGVTGSGKTFSVANVIAHVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERPDAIIVTTVSCIYGLGDPQSYLKMVLHVDRGDRLDQRELLRRLTGLQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAVRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLDAIEKIKDELRERLDYLRSQNKLVEAQRLEQRTRFDLEMIMELG
YCNGIENYSRYLSGRDAGEPPPTLFDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAICPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPQ
IEVRPALTQVDDLLSEIRKCVVKEERVLVTTLTKRMAEDLTDYLSDHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADNITGSMQRAMDETERRRNKQIAFNEANGIVPKGVKKDVQDILEGATV
PGSRSKKRRGEAKAAEESARYENELRSPSEITKRIRQLEEKMLSLARDLEFEAAAEARDE
IHKLRERLLQV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagttcgaactggtcacccgtttcaagccggccggcgatcaaccggaggccatt
cggcagatgatcgaaggcatcgaggcggggttgtcgcaccagacgctgctgggcgttacg
ggctcgggcaagaccttcagcgtcgccaacgtcatcgcccatgtgcagcggcctacgctg
gtgctggcgccgaacaagacgctggccgcgcagctctatggtgagttcaaggcgttcttc
ccgaacaatgcggtcgagtatttcgtttcctactacgactactatcagccggaagcctat
gtgccgtcgtcggacaccttcatcgagaaggatgcatcgatcaacgatcacatcgagcag
atgcgtctgtcggcaaccaaggcgctgctggagcgcccggatgcgatcatcgtcaccact
gtgtcgtgcatctacggtctgggtgatccccagtcatacctgaagatggtcctgcacgtc
gatcgtggtgatcggctcgatcagcgcgagctgctgcgccggctgactggcctgcagtac
acccgcaacgacatggatttcgctcgtgcgaccttccgtgtgcgcggcgacgtgatcgat
atcttcccggcggaatcggatctcgaagcggtgcgtatcgagctgttcgatgatgaggtg
gagagcctgtcggccttcgatccgctgaccggggaggtgatccgcaagctgccgcgcttc
accttctatcccaagagccactacgtgacgccgcgggaaaccctgctcgacgcgatagag
aagatcaaggacgagctgcgcgagcggctcgattacctgcgcagtcagaacaagctggtg
gaggcgcagcggctcgagcagcgcacgcgtttcgatctggaaatgatcatggagctgggt
tactgcaacggcatcgaaaactactcgcgctatctgtccgggcgcgatgccggcgagccg
ccaccgacgctgttcgattacctgccggccgacgcgctgctggtgatcgacgagtcccac
gtgtcggtgccgcaggtcggcgcgatgtacaagggcgaccgctcgcgcaaggaaaccctg
gtggagtatggcttccgtctgccatcggcgctggataaccggccgatgcgcttcgacgaa
tgggaggcgatctgcccacagaccatcttcgtctccgcgacacccggaccttacgaggcc
gaacatgctggccgcgtggtggagcaggtcgtgcgtccgacgggcctggtcgatccgcag
atcgaggtgcgtcctgcactgacccaggtcgacgatctgctgtcggagattcgcaagtgc
gtggtcaaggaggagcgggtgctggtcaccacgctgaccaagcgcatggccgaggacttg
accgactacctgagtgatcacgatgtgcgcgtgcgctacctgcattcggacatcgatacc
gtggaacgggtcgagatcatccgcgacctgcggttgggcactttcgatgtgctggtgggc
atcaacctgctgcgcgaaggcctggatatgcctgaggtgtcgctggtggcgatcctcgat
gcggacaaggaaggcttcctgcgttcagagcgctcgctgatccagaccatcggccgcgcg
gcgcgcaatctcaacggtcgcgcgattttgtatgccgacaacatcaccgggtccatgcag
cgcgccatggacgaaaccgagcggcggcgcaacaagcagattgccttcaacgaggccaac
ggcatcgtgcccaagggcgtgaagaaggacgtgcaggacatcctcgaaggcgcaaccgta
ccgggctcgcgcagcaagaagcggcgtggcgaggcgaaagcggcggaggagagtgcgcgt
tacgagaacgaactgcgttcgccgagcgagatcaccaagcggattcgtcagctggaagag
aagatgctgagtctggcgcgcgatctggagttcgaggcggccgccgaggcgcgcgacgag
attcacaagctgcgcgagcgcttgttgcaggtctag
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