Pochonia chlamydosporia: VFPPC_02143
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Entry
VFPPC_02143 CDS
T09407
Name
(RefSeq) lipid A export ATP-binding/permease protein msbA
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VFPPC_02143
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pchm02000
]
VFPPC_02143
04147 Exosome [BR:
pchm04147
]
VFPPC_02143
04090 CD molecules [BR:
pchm04090
]
VFPPC_02143
Enzymes [BR:
pchm01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
VFPPC_02143
Transporters [BR:
pchm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
VFPPC_02143
Exosome [BR:
pchm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VFPPC_02143
CD molecules [BR:
pchm04090
]
Proteins
VFPPC_02143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
SMC_N
AAA_22
AAA_21
AAA_29
AAA_16
RsgA_GTPase
AAA_23
AAA_30
DO-GTPase2
nSTAND1
DUF87
AAA_33
AAA_15
KAP_NTPase
Zeta_toxin
MeaB
Motif
Other DBs
NCBI-GeneID:
28845836
NCBI-ProteinID:
XP_018138942
UniProt:
A0A179F7I8
LinkDB
All DBs
Position
1:8132158..8136627
Genome browser
AA seq
1282 aa
AA seq
DB search
MKPQEAEDEKAGGGTVQGQQNDGPAAADSPTLGAAKTEGDDAKKDDAPKDGFGQLMQVLT
FSSPADRAIQVVCLVAAICSGAALPLMALVLGRLTAGFTSFGAEGSDTPKDAFMTSVQTN
ALYFIYLFIGKFVLVYIWSFGFTFTANRTVQALRLTCLDKILNRSIAEHDGETPGSLSNA
ITTHCNSIQTALSDRIGIMIQSFAMLIASFAVAFSQSWQLTLVMFGLVLITIALIGGIVG
SDQKIEAGLLKEYAECSAIAEDALGSIKTVVAFGAANKFLAKYQNILVRAEKQGKKRGPL
VGLMFACQFFFMFVGWAIGFYLGAYLYVRGSISDAGRILAVFFAMLIGLGAMMALGPNMP
SFIKAIAGAGIVFRLLGDDGAKRLDKASIKEEVEGPTCNGRIELRDVSFTYDSRPDRVAL
SNINLEFQRGTCTAVVGPSGAGKSTFIALLERWYQPTSGSILLDGNDVSELGVKWLRKQI
ALVQQEPQLFNASIFDNIAHGLVGTDHENAPAEEKKRLVEYACNQARVSEFVQKLPDGLD
TNVGDRASLISGGQKQRIAIARALVGRRPVLLMDEATSALDGENSEVIEALLTASENRTT
IFISHKIASAKRADRVVVMDKGTIAEIGTHSELMHAGGLYKRLHDAQVELETEEDTVDYI
RRRPSTHTTGAAGDDAETAQPTEEQTELPELRKRSIFANLWTIFGEQKRFWHIFFIGAAA
AVVTAQIFPVQAILLGRVLQTFQNPIDEVQSLANFWALMFFVVGLGALLAYAVLGFFMTL
FGMHLTTFYRHEYFRAVLTQRMEFFDRIASGAIVSRLSTDPANLHELISVNIGLLISIFV
SVISGSIIALAFSWKFALVAIFGAMPMAFFAGFIRMKLDTTLAEATIKVFEESARFASDA
LSVIRTVKAFTMEDTVRRSYENHLATSIGKLYKQTAVITLFFALSESLELLAAALAFWYG
GKLLSDGETDTEKFFTVFIAVIVGGQAAGALFGFSSNIGKAKVSANNILGIRSGIATSGT
QDQLSDGEDEKPSGAVIDFQNVSFSYPTRRDVQVLNNISLRIHSGQTVGIVGESGSGKST
LLALLERFYDVQSGRLQVFGKSISSYDVDQYRSRLAIVPQEPILYKGSVRENVVLGVDES
KIEDEQVVQACNAANLTEFIASLPDGYNTDSGGTTGTAFSGGQKQRIAIARALVRNPEVL
LLDEPTSALDAESEQMVRDTLHSIQGGRTMVIITHRLNIVRHADVIIVMAGGKIVEQGSH
NELLGKRGHYFRMYHSSRGEEM
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgcaggaggcggaggatgagaaggccggcggtggcacagttcaaggccagcaa
aatgatggcccagcagccgccgattctcccaccctcggagctgccaagacggaaggtgac
gatgcgaagaaggatgatgctcccaaagatggcttcggacagcttatgcaagttttgacc
tttagttcacctgccgatagagcaatccaagtcgtgtgtcttgttgcggccatctgcagc
ggagctgctttgccattgatggctttggttctgggtagactcaccgccggcttcacctcg
tttggcgccgaaggcagcgacacgcccaaagacgccttcatgaccagcgtgcaaaccaac
gcattgtactttatctatctgttcatcggcaaatttgtgctcgtttatatctggagcttt
ggatttacattcacggccaatcgtacagtgcaagccctgcgtctcacgtgtctggacaaa
atcctcaaccgcagcattgctgaacacgatggcgagacccccggtagcctgtccaacgcc
atcacaacgcactgcaactcgatccaaaccgcactatccgacagaattggcatcatgatc
caatccttcgcaatgcttattgcttcttttgctgtcgccttttcccaatcctggcagttg
acgctcgtcatgtttggcttggtcttgatcacaatcgctttaatcggtggcattgttggc
agcgatcagaaaatcgaggcaggacttctcaaagaatacgcggaatgcagtgctatcgcc
gaagatgcacttgggagcatcaaaactgtcgttgcctttggagcagcaaacaagttcctc
gctaaatatcaaaacatcttagtcagggccgagaaacagggcaagaaacgaggaccattg
gttggtctcatgtttgcctgtcagttcttctttatgtttgtcggctgggctattggtttc
tatcttggagcatacctttacgtccgcggttcgatttctgatgcgggtagaattcttgcc
gtcttcttcgccatgttgattggtctcggagctatgatggccctgggtccaaacatgccg
agctttatcaaggctattgccggagcaggcattgtcttccgattgcttggagatgacgga
gcaaaacgtcttgacaaggcatccatcaaagaagaagtggaagggcctacgtgcaacggc
cgcatcgaattacgcgacgtctcctttacctacgattctcgcccagatcgtgtagcgctt
tccaacattaatctcgaattccagcgaggcacgtgtactgcagtcgttggtccatcagga
gctggaaaaagcacattcattgccctgctagagagatggtaccagccaacttctggatct
attctgcttgacggaaatgatgtatccgagctcggcgtcaaatggctccgaaagcaaatc
gcccttgtgcagcaagaaccacaactctttaatgcctccatctttgacaatattgcccac
ggccttgtgggcactgatcacgagaatgctcccgccgaggaaaagaagcggctcgttgaa
tatgcatgcaatcaggcccgagtatccgaatttgtgcagaagcttccagatggtcttgat
acaaatgtaggagaccgcgcctcgctcatctccggtggacagaaacagcgtattgcaatt
gcccgtgcccttgtcggccgtcggccagttcttctcatggatgaagcaaccagcgctctt
gatggtgagaattcggaggtcatcgaagctcttctaactgcatccgagaaccgaacgaca
attttcatttcccacaagattgcgtcggcaaagagagcggatcgcgttgttgtcatggat
aaaggcacgattgctgaaattggaacccattccgagctgatgcatgccggtggtttgtat
aaacgtcttcatgatgcacaagtcgagctagagacagaggaggacactgttgactacatc
agacggcgaccttcaactcacaccactggtgcggctggtgatgatgcggaaaccgctcaa
ccaactgaagagcaaaccgaacttcccgagctgcgaaaacgatccatctttgccaacttg
tggacaatatttggcgaacagaaacgattctggcatatattcttcattggagccgctgcc
gctgttgtcaccgcccagatcttcccggttcaagccatcctcctaggcagagttctgcag
acattccaaaaccccatcgacgaagtacagtccctcgccaacttttgggcccttatgttc
tttgtggttggtcttggggcactcctggcgtatgccgtcttgggtttcttcatgaccctg
tttggcatgcatctcactactttttaccgccacgaatacttccgagctgttctcacgcag
agaatggagttttttgatcgtatcgcatctggtgcgattgtgtcccgactctcaacagat
ccagcaaatctccacgagctcatctctgtaaacatcggtcttctcatctccatctttgtc
agtgttatcagcggaagcatcattgcacttgccttctcctggaagtttgccttggtcgcc
attttcggcgctatgcccatggcattcttcgctggttttatccgcatgaagctagatacc
actctcgctgaagctaccatcaaggtgtttgaagaaagtgctcggttcgcttccgacgcc
ctgtctgtcatacgcacggtcaaggcgttcaccatggaagatactgtgcgtcgctcatac
gagaatcatctggctacctctatcggcaaactctacaagcaaaccgccgtcattacgctt
ttctttgccctttccgagagtcttgaacttctggctgctgcgctggctttctggtacggt
ggtaagctgcttagcgacggagagactgatactgagaaattcttcacggtgtttattgcc
gtaattgtgggaggccaggctgccggtgcactctttggattctcatccaatatcggcaaa
gccaaggtgtcggctaacaatattttgggcatccgcagcggaattgcgacctcaggcacg
caagatcaactatcagacggagaggacgagaagccatcgggcgcggttattgacttccaa
aatgtctcattttcctaccctactcgacgtgatgtccaagttctgaacaacatttccctt
cggatacactctggtcagacggtcggtatcgtgggcgaatctggctctggaaagtctact
ctgcttgctctgttggaacgtttctatgatgtccagtctggccgattgcaggtatttgga
aagtcgatttcgtcatacgacgtagaccagtaccgctcgagactcgccattgtgcctcag
gagccaattctctacaaaggctcggtgcgggaaaacgttgttctcggtgtggatgagagt
aagattgaagatgagcaggtggttcaagcctgcaatgccgccaatttgactgaattcatt
gcttcacttcccgacggttataacacggactcgggcggtacgacgggcacagcattttcg
ggtggccaaaagcagcgtattgcaattgctagagccctcgtacgaaatcctgaagtgctt
ctgcttgatgagccaaccagtgcgcttgatgccgagtctgagcagatggtccgcgatact
cttcacagcatccaaggtggacggacaatggtcattattactcatcgcttgaacattgtc
cgacatgccgacgtgatcatcgtaatggcgggaggtaaaatcgtagaacagggttcgcac
aacgagcttttgggcaagcgagggcattacttcagaatgtaccactcttctcggggtgaa
gaaatgtaa
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