Pochonia chlamydosporia: VFPPC_11010
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Entry
VFPPC_11010 CDS
T09407
Name
(RefSeq) lipid A export ATP-binding/permease protein msbA
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VFPPC_11010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pchm02000
]
VFPPC_11010
04147 Exosome [BR:
pchm04147
]
VFPPC_11010
04090 CD molecules [BR:
pchm04090
]
VFPPC_11010
Enzymes [BR:
pchm01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
VFPPC_11010
Transporters [BR:
pchm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
VFPPC_11010
Exosome [BR:
pchm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VFPPC_11010
CD molecules [BR:
pchm04090
]
Proteins
VFPPC_11010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_29
RsgA_GTPase
AAA_21
AAA_28
AAA_15
AAA_23
AAA_5
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
28853285
NCBI-ProteinID:
XP_018136921
UniProt:
A0A179F054
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MPEDKNEAAIAASPPHSGDTDKSITIDSNSADQTDGKKEGQDEASSSFKSFLRVFTYNDR
LGWVLNIIACLGMIGAGTVLPLMDVVFGKFVNTFNNFVIGKLSPGEYMDEVSRFTLYFVY
LFIARFCLTYVWTVLVNITAIRTTKQLRVDFVRQTLRQEISFFDNPSSSVSSQITTNGNL
VNHGISEKLGLVIQALSMFVSAFVVAFIVQWKLTLITLAIVPVNTVVTLGCIYVDALYEY
RMFDIYAESGSLAEEAFATIRTAHAFWAFPKLSMRFDRILERARQIGKKKSLVYAILFPI
EFFSVIAGYALAFWQGMRMYSTGEIHDPGTVVTVIFAVLVAAQALTQIAPQTIAISKAMA
AAQDLFSIIDRKSAIDSLSDGGETIDGFKGDIKLRGVRFSYPSRPGVPILHGLDLDIPSD
KTTALVGASGSGKSTIFGLLERWYSYSAGLITLDGYKLEDLNLRWLRTNIRLVQQEPTLF
SGSIYQNVVDGLTGTNKEDLPFEEKRSLVVEACKAAFAHDFIQDLPNEYDTWIGERGASL
SGGQKQRIVIARSIIANPKVLLLDEATSALDPNAEKIVQAALNNVAKGRTMIVIAHRLST
IQDADNIVVMSKGETIENGTHSELIQLGGAYARLVRAQDLGKKSDSVGDESEDDTDGPVV
DMDKEVTRVSTTGSMRVDSADGGKKYGLLHGLILILKEQKTLWWPSFIIFLTCVAGGGTY
PALAVLFSKTMSAFETVDVKKANFFALMFFVVALGNLVLYAVAGWLANIVAQTIMKFYRA
EIFNNTLRQDMPFFDKPENGTGALVARLSSEPTSLQELLSMNIALLIICIVNLVASCILA
IVSGWKLGMVLTFGALPFVVGSGYMRIRLEFKFEEDTVERFAKSSAVAAEAVMGIRTVSS
LALEQAVVERYNEKLQGIARQAIGNLGFKMFFYALSQSVSLLAMGLGFWYGGKLVSTGEY
TSSQFYIVFIAIVFSGEAAAMLFQFTTSITKAGTAMNYIFRLRRERVLFDDLDGDSQPES
TMTEKLPSGKGTEMAFDNVQFSYPLRPKLKVLRGIDATIKSGKMVAFVGASGCGKSTMIA
LLQRFYDPTSGELRANNQDVKTLDRCKYRRDIALVQQEPVLYQGSIRENISLGIERGNPS
EADIIEACKNANVWDFVASLPEGLDTPCGNQGLSLSGGQRQRIAIARALIRKPRLLLLDE
ATSALDTESEKVVKEALDRAAEGRTTIAVAHRLSTIRDADAIAVFARGNIVELGTHDELL
DRKGMYYEMVLGQSLDREAA
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaggacaaaaatgaggcggcaatcgctgccagcccgccgcattcaggcgacacc
gacaagtccatcaccattgattctaatagtgccgaccaaacggacggaaagaaggagggc
caagatgaagcaagctcaagcttcaagtctttcctacgagtattcacatacaacgatcgc
ctgggatgggtcttgaacattatcgcctgtttgggtatgattggggctggcacagtctta
ccgttaatggatgttgtgtttggaaagtttgtcaacacatttaacaacttcgtcattgga
aaactgtcacctggggagtatatggatgaagtcagtcgattcactttgtattttgtgtac
cttttcatcgccagattttgcctaacttacgtttggacggtccttgtcaatatcacggcg
atacgcaccaccaaacaactgcgagtcgactttgtgcgccagacgttgcgccaagagata
tcattcttcgacaatccttcttcctcagtatcgagccaaatcaccactaatggtaacctt
gtcaaccatggcatctcggagaaattgggactcgtcatccaggcgctctccatgtttgtc
tcggcctttgtcgtcgcctttatcgtccaatggaagttgactctcatcacactggctatc
gtcccagtcaacaccgtcgtcacattgggctgcatatacgtggatgcattatatgagtat
agaatgtttgacatctatgccgaatcggggtcgctggcggaagaagcatttgcgacgatc
cggactgcccacgcattctgggctttcccaaagctgtcgatgcgattcgatagaatactg
gagagagctagacaaattggcaagaaaaagtctttagtctacgctattctgtttcccatt
gagtttttcagtgtcattgccggctacgctttggccttctggcagggcatgaggatgtat
tccactggcgaaattcatgatccaggcactgtcgttacggtcatttttgctgtcttggtc
gcagcccaggcccttacccagattgcacctcagaccattgccatttccaaagcgatggcc
gcagcccaagacttgttctccatcatcgaccggaaatctgcaatcgactcactctctgat
ggtggggagaccattgacggtttcaagggcgacatcaaattgcggggagtgcgattctca
tacccatcccggccaggtgtgcctatcctccatggcctggacttggatattccatcagat
aagacgactgccctggttggtgctagtggctcgggaaagagcactatttttggacttctg
gagcgctggtattcgtattctgctggacttatcaccttggacggctacaagttggaggac
ctcaatttgcgatggctaaggaccaacatacgactcgttcaacaagaacccactctattc
agtggcagcatataccaaaatgtcgttgatgggctgacgggcactaacaaggaagatttg
ccattcgaggagaagcgatctcttgtggtagaggcttgcaaagccgcttttgcgcatgac
ttcattcaagacctgccaaatgaatatgatacttggattggtgagcgtggcgcgtcgctc
tctggaggccaaaagcagcgaatcgtcattgcgcggagcataattgccaaccccaaggtg
ctactattagacgaagccaccagcgcattagatccaaatgccgaaaaaatcgttcaggcc
gcactaaacaatgtcgctaaaggccgaaccatgatcgttattgctcatagattgtccaca
attcaggatgcggacaatattgtggtcatgtccaagggcgaaaccatcgaaaacggaacc
cactcagagctgattcaactcggcggagcctatgctaggctcgttcgagcccaggatctc
ggcaagaagtctgattccgtcggagatgaatccgaggatgacacggacggacctgttgtt
gacatggataaagaagtcacgcgggtttcaacaactgggagtatgcgtgtcgatagcgcg
gatggtggcaagaagtatggccttcttcatgggctaatcctgattctcaaagaacaaaag
acgttgtggtggcctagctttattatcttcttgacctgtgttgcaggaggcggtacctat
ccggcgcttgccgtcttattctccaagacaatgtctgcatttgaaaccgtcgacgttaag
aaggccaactttttcgccctgatgttctttgtggtagcgttgggaaatcttgtcctgtac
gccgttgctggatggctggccaatattgttgcgcagactatcatgaagttttaccgcgcc
gaaatcttcaacaatacgctgcgacaagacatgccattctttgacaagccggagaacgga
acgggagctctggtggccagactctcttcagaacccacaagtctccaagaactattgtcg
atgaatattgcccttcttatcatctgcattgtaaaccttgttgctagctgtatccttgcc
atcgtatcgggatggaagctgggcatggttctcacattcggcgctctcccctttgtcgtt
ggatcaggatacatgcgaatacgacttgagttcaaattcgaagaagatacagtggagcgc
ttcgccaagagcagcgcggtggcagccgaagcggtcatgggtattcggacagtgtcatcc
ctggcactggagcaagccgtcgttgagcgttataacgagaaattacagggcatcgcgcgg
caagccattggaaacctcgggttcaagatgtttttctacgcacttagtcaatccgtctca
ttgcttgcgatgggactaggcttctggtatggtggtaagcttgtgtccactggcgagtac
acttctagccagttctacattgtcttcatcgccatcgtcttctcaggcgaagcagctgcc
atgttattccaattcacaaccagcatcaccaaagcaggcacagcgatgaactacatcttc
cgcctgcgccgcgagcgagtcctgtttgacgacctggacggcgattctcaacccgaaagc
acaatgactgaaaagctaccgagtggaaagggcaccgaaatggcgttcgacaacgtgcag
ttctcctatccgctgcggcccaaactaaaggtactccgggggattgacgctaccataaag
tctggtaaaatggttgcctttgtaggcgcttctggctgcggaaaatccaccatgatagca
cttctacagcgcttttatgatcctacgagcggcgagctccgcgctaataaccaagacgtc
aaaactcttgataggtgtaaataccgtcgtgatattgcacttgttcagcaagagcccgtt
ctatatcaaggatctatacgagagaacatctctcttggcattgagaggggcaatccatca
gaggccgacatcattgaggcatgtaaaaacgccaatgtgtgggatttcgtcgcttccctc
cctgaaggcctcgacacgccatgcggtaaccagggtctatcactatctggtggtcaacgg
cagcgcatcgccattgcgagggcattaattcgcaagccccgattgttgttgctcgacgag
gcaaccagtgcactggataccgaatctgaaaaggttgttaaagaggctttggatcgtgcg
gcagagggcaggacgactattgcggttgcccatcggttgagcaccattcgggacgcggat
gccattgctgtttttgcaagggggaatatcgttgaactcggtacacatgatgagttgttg
gatagaaagggcatgtattacgagatggtgctgggccagtcattggatcgggaggcagca
tga
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integrated database retrieval system
