Penaeus chinensis (fleshy prawn): 125036500
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Entry
125036500 CDS
T08118
Name
(RefSeq) single-minded homolog 1-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchn03000
]
125036500
Transcription factors [BR:
pchn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125036500
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SSDB
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GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
125036500
NCBI-ProteinID:
XP_047485092
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All DBs
Position
21:1292874..1405852
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AA seq
656 aa
AA seq
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MHDIIKMCSFEGTKSTKGASKMRRDLLNSEISQLRDLLPLPASTRQRLSQLQLMALVCVY
VRKSNYFQQDFSLFSPSAMKHTPASRAEAPNLEFLKALSGFLMMLTQGGKLLYISDNAAE
YLGHSMEDLLIHGDSVYDIIDKQDHAAVQAELVRGAQTAAAAHEEDRLFLCRMNVSRNAR
RQMRFGDQKVVLVAGHYLSYLPLCSRNEPVFLAHCTPVAMPETRESVVQGATNVFTSVHT
LDMKFINLDKNGEFYLGYNRSSLAGVSWYHLIHPENMREAQTKHRLITTSEQDRSCIVLL
RLQAAGGTWRWVHCVLQLKDGGETGQTPPQASPQGAQQVAALSPSGGSSSSSSSSSNGGN
SGGGSSGGGGGQSQQPVIVATNQVLGEKEAAVLRANSWLYHYYTMQSKLQYGLAYDTHAH
RVHAYYPQVMTYQTDPAASYMNPPALNGGHYHQSYAAPAAHSPYSLASPSAYAHLQHYHH
HYSVRLQHGLDYSRDPAWGYYDAAPASSALTSASAHAGAAPPARSGRASESPSETRRKSP
AAPAAHGSVAEGGGVAVATPVAVRAAPAGVHKGASSPELDQLEAPWKASPTQEVPDYPEY
SPYITPPYSAATPTKHHVFSFDHGDPRDAHAHQDQHVPSGPPDPRDAPWYSHAFVR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatattatcaagatgtgcagcttcgagggcaccaagtccaccaagggcgcctcc
aagatgcgccgcgacctccttaactcggagatcagtcagctgcgggacctcctgccgctg
ccggcgtccacgcgccagaggctgtcgcagctgcagctcatggccctcgtctgcgtctac
gtcaggaagagcaactacttccagcaagatttctccctcttctctccctcagccatgaag
cacacgcccgccagccgagcggaggcgcccaatctggagttcctgaaggctctcagcggt
ttcctcatgatgctgacccagggaggaaagctgctctacatctccgacaacgctgctgag
tacctcggacactccatggaggacctcctgatccacggcgacagcgtctacgacatcatc
gacaagcaggaccacgcggccgtgcaggcggagctggtgcggggcgcgcagacggccgcc
gccgcccacgaggaggaccgcctcttcctctgcaggatgaacgtgtccaggaacgcccgc
aggcaaatgaggttcggggaccagaaggtagtcctggtggcggggcactacctgtcgtac
ctgccgctgtgctcgaggaacgagcccgtgttcctggcccactgcacgcccgtcgccatg
cccgagacccgcgagagcgtcgtccagggcgccaccaacgtcttcacctccgtccacacc
ctcgacatgaagttcatcaacctcgataagaacggcgagttctacctgggctacaaccgc
tcctcgctggccggcgtgtcgtggtaccacctgatccaccccgagaacatgcgggaggcg
cagaccaagcacaggctcatcacgacgagcgagcaggaccggtcgtgcatcgtcttgctg
cggctgcaggcggcgggcggcacgtggcgctgggtgcactgcgtcctgcagctcaaggac
ggcggcgagacgggccagacgcccccccaggcctccccacagggcgctcagcaggtcgct
gccctcagcccctcggggggcagcagcagcagtagcagcagcagcagcaacggaggcaac
agcggcggcggcagcagcggcggcggcggcggccagagccagcagccggtgatcgtggcg
acgaaccaggtcctgggcgagaaggaggcggccgtcctgcgcgccaactcgtggctctac
cactactacacgatgcagtccaagctgcagtacggcctcgcctacgacacgcacgcgcac
cgcgtccacgcctactacccgcaggtcatgacctatcagacggaccccgcggcgtcctac
atgaaccctccggcgctcaacggcggccactaccaccagtcctacgccgcgcccgccgcc
cactcgccctactcgctggcctcgccctccgcctacgcccacctgcagcactaccaccac
cactactccgtccgcctgcagcacggcctcgactactcgcgcgaccccgcctggggatac
tacgacgccgcgcccgcgtcctccgccctcacctccgcctccgcacacgccggcgccgct
ccgcccgcgcgcagcggccgcgcgtccgagtcgccgtcggagacgaggcgcaagtcgccg
gcggcgcccgcggctcacggcagcgtggccgagggcggcggcgtggcggtggcgacgccc
gtggcggtgcgggcggcccccgccggcgtgcacaagggcgcctcgtcgcccgagctggac
cagctggaggcgccatggaaggcgtcgccgacgcaggaggtccccgactaccccgagtac
tcgccctacatcacgccgccctactcggcggccacgcccaccaagcaccacgtcttctcc
ttcgaccacggcgacccgagggacgcccacgcccaccaggaccagcacgtgccctcgggc
ccgcccgacccacgcgacgccccctggtactcgcacgccttcgtcagataa
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