Pseudomonas cichorii: PCH70_04720
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Entry
PCH70_04720 CDS
T03002
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pci
Pseudomonas cichorii
Pathway
pci02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PCH70_04720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pci03021
]
PCH70_04720
Transcription machinery [BR:
pci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PCH70_04720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
Rv2175c_wHTH
HTH_24
HTH_31
HTH_11
HTH_10
Sigma70_r3
MerR
HTH_3
HTH_40
GerE
HTH_5
MarR_2
HTH_28
FaeA
HTH_29
PCI
HTH_IclR
HTH_17
Phage_terminase
EAP30
BACK
HTH_36
TnsD
Motif
Other DBs
NCBI-ProteinID:
AHF65625
LinkDB
All DBs
Position
complement(506130..506609)
Genome browser
AA seq
159 aa
AA seq
DB search
MLYRDHRSWLLAWLRRNVACPQRAEDLSQDTFVRLLGRDELKTPNEPRAFLAAIAKGLLF
DYFRRAALEQAYLNELMLIPEAEHPSPQDQLLILEDLKAIDRMLDKLSSKARAAFLYNRL
DGLSHGEIAERLGVSVSRVRQYLAQAMRQCYIALYGEPT
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgttgtatcgcgaccatcgcagctggctgctggcctggcttcgacgcaatgtggcctgc
ccgcagcgggccgaagacctgagccaggacactttcgtacgcctgctgggacgtgacgaa
ctcaagaccccgaatgaaccacgcgcctttctggcagcgatcgccaaaggtctgttgttc
gactatttccgccgcgcagcgctggaacaggcttatctcaatgagctgatgctgatcccg
gaagccgaacacccttccccgcaggatcaattactgatccttgaagacctcaaggccatc
gaccggatgctggacaagctgtcgagcaaagcccgggcggcgtttctgtacaaccgtctg
gacggcctgagccatggcgaaatcgccgagcgtctgggggtttcggtttcacgggtgcgg
caatacctggcccaggccatgcgccagtgctacatcgccctttatggcgagccgacatga
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integrated database retrieval system
